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YP_005454279.1
Arc-VirNC_017088__YP_005454279.1__HRPV-3-gp07__00007
Identity
- Accession:
- NC_017088 ↗
- Protein ID:
- YP_005454279.1 ↗
- Kingdom:
- archaea
Quality
87.8
mean pLDDT
Taxonomy
Trapavirae›
Saleviricota›
Huolimaviricetes›
Haloruvirales›
Pleolipoviridae›
Betapleolipovirus›
Halorubrum_pleomorphic_virus_3
TaxID: 1156720
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.78 | 60.0 | 3.93e-01 | 83.6% | 21.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.78 | 67.0 | 4.76e-01 | 96.4% | 91.4% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 61.0 | 3.92e-01 | 87.3% | 49.8% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.76 | 53.0 | 4.80e-01 | 83.6% | 53.9% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.76 | 55.0 | 3.56e-01 | 76.4% | 30.0% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.76 | 60.0 | 5.41e-01 | 85.5% | 76.0% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.74 | 47.0 | 3.42e-01 | 80.0% | 23.2% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.73 | 64.0 | 5.42e-01 | 98.2% | 74.2% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.71 | 62.0 | 4.87e-01 | 98.2% | 60.0% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 62.0 | 3.76e-01 | 100.0% | 19.0% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 54.0 | 3.29e-01 | 96.4% | 12.3% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.70 | 53.0 | 3.68e-01 | 83.6% | 97.4% |
| 2sliA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 54.0 | 3.65e-01 | 83.6% | 26.5% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.69 | 51.0 | 3.99e-01 | 80.0% | 80.2% |
| 4joxA00 | 2.60.270.50 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.69 | 56.0 | 4.46e-01 | 92.7% | 72.0% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 58.0 | 3.48e-01 | 98.2% | 16.0% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.68 | 50.0 | 3.36e-01 | 81.8% | 34.2% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.67 | 50.0 | 4.94e-01 | 81.8% | 81.7% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 57.0 | 3.38e-01 | 100.0% | 15.6% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.67 | 48.0 | 3.63e-01 | 78.2% | 65.0% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.66 | 57.0 | 4.50e-01 | 100.0% | 53.7% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 56.0 | 3.53e-01 | 98.2% | 19.0% |
| 1pguA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 56.0 | 3.48e-01 | 96.4% | 24.4% |
| 3jamg01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 55.0 | 3.46e-01 | 96.4% | 23.5% |
| 1s4uX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 56.0 | 3.44e-01 | 98.2% | 22.8% |
| 1xksA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 58.0 | 3.51e-01 | 100.0% | 19.5% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 56.0 | 3.43e-01 | 100.0% | 23.2% |
| 4u7aA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 55.0 | 3.42e-01 | 100.0% | 17.4% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 54.0 | 3.38e-01 | 98.2% | 18.4% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 54.0 | 3.41e-01 | 100.0% | 20.0% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.64 | 46.0 | 4.18e-01 | 83.6% | 55.8% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 55.0 | 3.36e-01 | 100.0% | 21.2% |
| 5cxbA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 53.0 | 3.24e-01 | 98.2% | 16.3% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.63 | 51.0 | 4.52e-01 | 96.4% | 75.3% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.63 | 44.0 | 3.57e-01 | 85.5% | 38.3% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 50.0 | 3.32e-01 | 98.2% | 96.1% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 4.07e-01 | 72.7% | 83.1% |
| 2wpgA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 46.0 | 4.16e-01 | 80.0% | 98.7% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 50.0 | 3.85e-01 | 96.4% | 65.3% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 42.0 | 3.17e-01 | 74.5% | 42.3% |
| 2o3bB00 | 3.40.1460.10 | Alpha Beta › 3-Layer(aba) Sandwich › Nuia › Nuclease A inhibitor-like | 0.61 | 50.0 | 3.92e-01 | 100.0% | 73.3% |
| 5aq1A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 43.0 | 2.87e-01 | 81.8% | 21.9% |
| 7pjcA02 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.60 | 51.0 | 3.96e-01 | 98.2% | 59.7% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.60 | 43.0 | 3.22e-01 | 78.2% | 36.1% |
| 6az1g01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 49.0 | 3.16e-01 | 100.0% | 17.8% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.59 | 48.0 | 3.48e-01 | 100.0% | 29.9% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 42.0 | 3.78e-01 | 74.5% | 51.2% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 47.0 | 3.83e-01 | 98.2% | 60.8% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.59 | 51.0 | 3.90e-01 | 96.4% | 65.9% |
| 3u2aA00 | 3.30.450.310 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 46.0 | 3.84e-01 | 98.2% | 77.7% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 48.0 | 4.61e-01 | 100.0% | 81.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 46.0 | 3.54e-01 | 100.0% | 86.5% |
| 4m1xD00 | 3.30.1360.240 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 41.0 | 3.78e-01 | 78.2% | 100.0% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 45.0 | 3.52e-01 | 94.5% | 45.1% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.05e-01 | 92.7% | 76.8% |
| 2lmeA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.55 | 43.0 | 3.53e-01 | 87.3% | 46.7% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 43.0 | 3.58e-01 | 90.9% | 72.0% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 42.0 | 2.76e-01 | 94.5% | 56.6% |
| 2nvwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 38.0 | 2.68e-01 | 78.2% | 21.4% |
| 3wp4A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 42.0 | 2.94e-01 | 94.5% | 84.6% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.36e-01 | 92.7% | 81.1% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3402405 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.78 | 56.0 | 5.40e-01 | 76.4% | 77.8% |
| 3551142 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.78 | 62.0 | 4.51e-01 | 87.3% | 87.6% |
| 3001014 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.77 | 66.0 | 4.78e-01 | 98.2% | 91.2% |
| 4013292 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.76 | 61.0 | 4.54e-01 | 87.3% | 95.6% |
| 3624708 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.75 | 60.0 | 4.45e-01 | 87.3% | 92.6% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.74 | 59.0 | 4.44e-01 | 87.3% | 96.9% |
| 3605064 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.74 | 63.0 | 3.67e-01 | 100.0% | 10.9% |
| 3615586 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.73 | 65.0 | 3.87e-01 | 100.0% | 15.5% |
| 3936914 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.73 | 59.0 | 4.42e-01 | 87.3% | 96.9% |
| 3330702 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.73 | 64.0 | 3.94e-01 | 100.0% | 17.2% |
| 3708710 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.73 | 64.0 | 3.56e-01 | 100.0% | 8.5% |
| 3275971 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.72 | 63.0 | 3.84e-01 | 100.0% | 16.9% |
| 3586673 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 62.0 | 3.71e-01 | 98.2% | 24.7% |
| 3500426 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.72 | 64.0 | 3.86e-01 | 100.0% | 27.8% |
| 4880573 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.72 | 52.0 | 3.46e-01 | 78.2% | 30.8% |
| 3740897 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.71 | 63.0 | 3.88e-01 | 100.0% | 17.6% |
| 3717628 | 5.1.3.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7914 | 0.71 | 62.0 | 3.84e-01 | 100.0% | 18.5% |
| 5023758 | 210.1.2.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain | 0.71 | 52.0 | 3.36e-01 | 78.2% | 83.1% |
| 3599577 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 60.0 | 3.68e-01 | 96.4% | 16.6% |
| 3455310 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.71 | 60.0 | 3.75e-01 | 96.4% | 18.5% |
| 3724603 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.71 | 62.0 | 3.71e-01 | 100.0% | 27.2% |
| 3716765 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.71 | 62.0 | 3.53e-01 | 100.0% | 9.8% |
| 3787968 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 61.0 | 3.59e-01 | 100.0% | 20.2% |
| 3741319 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.71 | 60.0 | 3.95e-01 | 100.0% | 21.9% |
| 3177513 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.71 | 61.0 | 3.76e-01 | 100.0% | 42.3% |
| 3210163 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.71 | 62.0 | 3.61e-01 | 96.4% | 13.4% |
| 3886322 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.70 | 60.0 | 3.66e-01 | 100.0% | 14.8% |
| 3703422 | 5.1.4.598 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7914 | 0.70 | 61.0 | 3.63e-01 | 100.0% | 14.7% |
| 3444104 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 61.0 | 3.81e-01 | 100.0% | 20.6% |
| 3167022 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.70 | 61.0 | 3.56e-01 | 100.0% | 33.0% |
| 4003669 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.70 | 62.0 | 3.64e-01 | 100.0% | 13.3% |
| 3197023 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.70 | 60.0 | 3.66e-01 | 100.0% | 24.7% |
| 3929699 | 5.1.4.244 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd | 0.69 | 61.0 | 3.90e-01 | 100.0% | 35.5% |
| 3973416 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 60.0 | 3.66e-01 | 100.0% | 16.7% |
| 3730307 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 59.0 | 3.65e-01 | 100.0% | 17.7% |
| 3275762 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 59.0 | 3.56e-01 | 98.2% | 17.3% |
| 3230405 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 60.0 | 3.58e-01 | 100.0% | 20.3% |
| 3694574 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.68 | 59.0 | 3.47e-01 | 100.0% | 17.8% |
| 3738102 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 58.0 | 3.64e-01 | 100.0% | 17.6% |
| 3742423 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.68 | 59.0 | 3.27e-01 | 100.0% | 15.6% |
| 4652260 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.68 | 59.0 | 3.61e-01 | 98.2% | 22.5% |
| 3709736 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.68 | 58.0 | 3.54e-01 | 100.0% | 32.2% |
| 4019953 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.68 | 59.0 | 3.56e-01 | 100.0% | 23.4% |
| 4003315 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.68 | 54.0 | 3.29e-01 | 98.2% | 13.4% |
| 3297766 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.67 | 59.0 | 3.52e-01 | 100.0% | 19.8% |
| 3917795 | 5.1.4.173 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd | 0.67 | 56.0 | 3.48e-01 | 98.2% | 17.2% |
| 3191004 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.67 | 57.0 | 3.16e-01 | 100.0% | 6.8% |
| 4027492 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 57.0 | 3.67e-01 | 96.4% | 20.0% |
| 3429522 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 57.0 | 3.52e-01 | 100.0% | 27.2% |
| 3789432 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 58.0 | 3.43e-01 | 100.0% | 16.2% |
| 3415902 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 55.0 | 3.35e-01 | 98.2% | 20.2% |
| 4196888 | 5.1.4.327 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd | 0.67 | 57.0 | 3.46e-01 | 100.0% | 15.8% |
| 3605675 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 58.0 | 3.45e-01 | 100.0% | 14.0% |
| 3591236 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 56.0 | 3.21e-01 | 100.0% | 9.7% |
| 4017900 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.66 | 57.0 | 3.21e-01 | 100.0% | 14.5% |
| 3507351 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 56.0 | 3.44e-01 | 100.0% | 16.6% |
| 3517695 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.65 | 55.0 | 3.32e-01 | 100.0% | 16.7% |
| 4203120 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.65 | 56.0 | 3.34e-01 | 100.0% | 18.9% |
| 3505455 | 5.1.4.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 | 0.65 | 56.0 | 3.35e-01 | 100.0% | 24.2% |
| 3875861 | 5.1.4.146 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 56.0 | 3.30e-01 | 100.0% | 15.8% |
| 3630631 | 5.1.4.327 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd | 0.65 | 54.0 | 3.05e-01 | 96.4% | 15.3% |
| 3924468 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 55.0 | 3.44e-01 | 98.2% | 22.8% |
| 3837308 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.65 | 57.0 | 3.60e-01 | 100.0% | 20.3% |
| None | — | 0.65 | 55.0 | 3.35e-01 | 100.0% | 15.2% | |
| 3388897 | 5.1.4.407 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD | 0.65 | 56.0 | 3.39e-01 | 98.2% | 15.8% |
| 3375268 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.65 | 57.0 | 3.77e-01 | 98.2% | 43.6% |
| 5054830 | 5.1.2.63 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FG-GAP_3 | 0.65 | 56.0 | 3.62e-01 | 96.4% | 25.2% |
| 3925092 | 5.1.11.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › RMC1_N | 0.64 | 52.0 | 3.15e-01 | 92.7% | 19.2% |
| 4944579 | 4252.1.1.15 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF30558 | 0.64 | 48.0 | 3.31e-01 | 81.8% | 27.2% |
| 4028913 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 56.0 | 3.38e-01 | 100.0% | 17.7% |
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 55.0 | 3.32e-01 | 100.0% | 15.8% |
| 3230613 | 3755.3.1.410 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Nup88 | 0.64 | 55.0 | 3.20e-01 | 100.0% | 11.7% |
| 3630840 | 5.1.3.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Phytase | 0.63 | 53.0 | 3.33e-01 | 100.0% | 17.5% |
| 4012027 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 53.0 | 3.88e-01 | 98.2% | 64.8% |
| 5071253 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.63 | 51.0 | 3.92e-01 | 94.5% | 82.1% |
| 3960667 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 50.0 | 3.97e-01 | 98.2% | 74.1% |
| 3470979 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.61 | 54.0 | 3.36e-01 | 100.0% | 19.4% |
| 4030001 | 5.1.4.621 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Mcl1_mid | 0.61 | 51.0 | 2.93e-01 | 100.0% | 90.1% |
| 3506274 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.61 | 49.0 | 3.96e-01 | 98.2% | 65.6% |
| 5072821 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.61 | 50.0 | 3.75e-01 | 94.5% | 79.2% |
| 3560129 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.60 | 46.0 | 3.58e-01 | 83.6% | 51.2% |
| 3251391 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.60 | 51.0 | 3.19e-01 | 100.0% | 17.9% |
| 3772693 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.58 | 45.0 | 3.05e-01 | 83.6% | 24.8% |
| 138255 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.55 | 43.0 | 3.57e-01 | 90.9% | 71.3% |
D2
medium
residues 56-138
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 52.0 | 6.08e-01 | 89.2% | 86.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 49.0 | 5.22e-01 | 89.2% | 68.0% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 51.0 | 5.52e-01 | 91.6% | 73.6% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 52.0 | 5.85e-01 | 90.4% | 84.4% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 52.0 | 5.94e-01 | 89.2% | 87.3% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 6.30e-01 | 92.8% | 96.7% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 50.0 | 5.16e-01 | 92.8% | 67.5% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 44.0 | 4.95e-01 | 84.3% | 71.9% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 57.0 | 5.24e-01 | 100.0% | 60.0% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 43.0 | 5.36e-01 | 84.3% | 88.5% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 50.0 | 5.14e-01 | 95.2% | 68.8% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 50.0 | 5.83e-01 | 84.3% | 91.7% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 42.0 | 4.78e-01 | 84.3% | 71.4% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 43.0 | 5.21e-01 | 84.3% | 87.0% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 47.0 | 4.98e-01 | 86.7% | 69.7% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.75 | 55.0 | 4.54e-01 | 75.9% | 93.6% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 5.79e-01 | 97.6% | 90.8% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.75 | 54.0 | 5.23e-01 | 100.0% | 67.0% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 36.0 | 3.76e-01 | 78.3% | 51.3% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.73 | 53.0 | 5.08e-01 | 75.9% | 83.0% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.76e-01 | 96.4% | 69.0% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 43.0 | 4.13e-01 | 89.2% | 57.0% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 49.0 | 3.68e-01 | 78.3% | 70.4% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 47.0 | 4.41e-01 | 73.5% | 75.7% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 5.21e-01 | 97.6% | 92.4% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 46.0 | 4.26e-01 | 72.3% | 72.6% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 49.0 | 4.68e-01 | 77.1% | 77.7% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.84e-01 | 94.0% | 68.3% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 49.0 | 3.80e-01 | 80.7% | 80.0% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 48.0 | 4.15e-01 | 78.3% | 70.7% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 4.24e-01 | 95.2% | 67.4% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.60 | 55.0 | 4.50e-01 | 100.0% | 57.0% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 47.0 | 4.19e-01 | 85.5% | 77.5% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 48.0 | 4.46e-01 | 95.2% | 69.8% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 4.67e-01 | 100.0% | 98.5% |
| 3vvaA00 | 1.20.1260.140 | Mainly Alpha › Up-down Bundle › Ferritin › Alternative oxidase | 0.57 | 41.0 | 2.90e-01 | 74.7% | 83.5% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 47.0 | 3.32e-01 | 94.0% | 43.0% |
| 1ti2A03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.53 | 41.0 | 2.81e-01 | 81.9% | 69.5% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.53 | 40.0 | 4.14e-01 | 95.2% | 86.8% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 44.0 | 3.66e-01 | 92.8% | 91.0% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.92e-01 | 86.7% | 75.0% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 42.0 | 3.56e-01 | 91.6% | 57.6% |
| 1rc2A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 41.0 | 3.06e-01 | 91.6% | 36.8% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 42.0 | 4.03e-01 | 94.0% | 81.1% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 37.0 | 3.50e-01 | 79.5% | 86.5% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031363 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 54.0 | 6.08e-01 | 92.8% | 81.5% |
| 143506 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.81 | 51.0 | 6.20e-01 | 86.7% | 100.0% |
| 4084282 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.80 | 55.0 | 5.49e-01 | 92.8% | 69.4% |
| 4148139 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.80 | 55.0 | 4.37e-01 | 92.8% | 38.1% |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 55.0 | 3.59e-01 | 92.8% | 18.7% |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 53.0 | 5.76e-01 | 92.8% | 81.4% |
| 3663639 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.79 | 53.0 | 4.14e-01 | 92.8% | 34.3% |
| 3297365 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.78 | 54.0 | 4.19e-01 | 92.8% | 34.9% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.78 | 53.0 | 4.92e-01 | 96.4% | 58.0% |
| 4258677 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.77 | 55.0 | 3.93e-01 | 97.6% | 27.6% |
| 4511316 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.77 | 55.0 | 4.57e-01 | 97.6% | 44.6% |
| 3668669 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.76 | 53.0 | 5.34e-01 | 92.8% | 70.6% |
| 4060124 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.76 | 54.0 | 4.32e-01 | 94.0% | 39.4% |
| 3303765 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.76 | 54.0 | 4.26e-01 | 92.8% | 38.1% |
| 3978620 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.76 | 54.0 | 4.22e-01 | 94.0% | 37.0% |
| 3946805 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.76 | 54.0 | 5.68e-01 | 94.0% | 81.3% |
| 4518447 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.76 | 54.0 | 4.85e-01 | 94.0% | 55.5% |
| 3363617 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.76 | 54.0 | 5.37e-01 | 94.0% | 71.8% |
| 3980765 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 53.0 | 4.15e-01 | 92.8% | 36.4% |
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.76 | 53.0 | 3.93e-01 | 94.0% | 29.8% |
| 4253265 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.76 | 53.0 | 4.14e-01 | 92.8% | 36.4% |
| 4165729 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.75 | 52.0 | 4.08e-01 | 91.6% | 35.8% |
| None | — | 0.75 | 56.0 | 4.06e-01 | 98.8% | 29.5% | |
| 3644937 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.75 | 53.0 | 4.23e-01 | 94.0% | 38.1% |
| 4454772 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.75 | 50.0 | 5.56e-01 | 94.0% | 87.7% |
| 4056597 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.75 | 54.0 | 3.59e-01 | 94.0% | 20.1% |
| 3339569 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.74 | 54.0 | 5.28e-01 | 89.2% | 69.7% |
| 3329805 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.74 | 54.0 | 4.23e-01 | 89.2% | 38.7% |
| 3347305 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.74 | 53.0 | 4.20e-01 | 94.0% | 38.2% |
| 3964463 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.73 | 52.0 | 4.68e-01 | 92.8% | 55.5% |
| 5034407 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.73 | 51.0 | 5.53e-01 | 90.4% | 85.7% |
| 4056602 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.73 | 53.0 | 4.08e-01 | 92.8% | 36.0% |
| 3027028 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.73 | 52.0 | 4.72e-01 | 92.8% | 56.9% |
| 5050597 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.72 | 47.0 | 5.55e-01 | 88.0% | 100.0% |
| 4965159 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.72 | 50.0 | 5.39e-01 | 90.4% | 84.3% |
| 3943810 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.72 | 47.0 | 5.15e-01 | 88.0% | 84.6% |
| 4962234 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.71 | 51.0 | 5.35e-01 | 89.2% | 81.3% |
| 3191120 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.71 | 53.0 | 3.99e-01 | 78.3% | 81.5% |
| 4961639 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.71 | 51.0 | 5.21e-01 | 91.6% | 76.2% |
| 3278306 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.71 | 53.0 | 4.18e-01 | 97.6% | 38.8% |
| 3444766 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.70 | 52.0 | 5.00e-01 | 78.3% | 87.4% |
| 4961952 | 101.1.1.540 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 | 0.70 | 50.0 | 5.29e-01 | 91.6% | 82.7% |
| 3908710 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 53.0 | 5.05e-01 | 79.5% | 85.3% |
| 3289947 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.70 | 52.0 | 5.28e-01 | 98.8% | 80.0% |
| 3880943 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 52.0 | 4.97e-01 | 78.3% | 88.4% |
| 5042712 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 49.0 | 4.54e-01 | 73.5% | 79.0% |
| 3455559 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 52.0 | 5.02e-01 | 79.5% | 85.3% |
| 3701576 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.68 | 50.0 | 3.99e-01 | 77.1% | 82.4% |
| 3226893 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 47.0 | 4.91e-01 | 71.1% | 100.0% |
| 3701878 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.68 | 49.0 | 3.84e-01 | 75.9% | 83.4% |
| 3907483 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 52.0 | 4.67e-01 | 80.7% | 75.5% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 49.0 | 4.38e-01 | 75.9% | 72.2% |
| 5053418 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.67 | 47.0 | 4.57e-01 | 72.3% | 83.3% |
| 4485423 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.67 | 48.0 | 4.27e-01 | 75.9% | 69.2% |
| 5064400 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 48.0 | 4.61e-01 | 75.9% | 82.1% |
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 47.0 | 4.30e-01 | 75.9% | 73.0% |
| 3390609 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.66 | 48.0 | 3.79e-01 | 78.3% | 72.1% |
| 3302992 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.66 | 50.0 | 3.87e-01 | 80.7% | 83.8% |
| 3708827 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 48.0 | 3.82e-01 | 77.1% | 50.6% |
| 3185992 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.66 | 46.0 | 3.95e-01 | 73.5% | 57.8% |
| 3729348 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.66 | 49.0 | 3.90e-01 | 79.5% | 81.8% |
| 3632146 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.65 | 50.0 | 3.94e-01 | 80.7% | 82.4% |
| 3328518 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.65 | 50.0 | 3.84e-01 | 80.7% | 79.5% |
| 3805926 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 33.0 | 3.31e-01 | 100.0% | 47.1% |
| 3600385 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 50.0 | 3.72e-01 | 85.5% | 88.6% |
| 3296388 | 101.1.10.22 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ORC6 | 0.64 | 46.0 | 4.49e-01 | 75.9% | 86.7% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.64 | 48.0 | 3.58e-01 | 79.5% | 68.8% |
| 3249600 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 47.0 | 3.78e-01 | 79.5% | 50.3% |
| 4391471 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.62 | 38.0 | 4.65e-01 | 84.3% | 94.5% |
| 3655226 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.62 | 48.0 | 4.08e-01 | 83.1% | 68.1% |
| 3429968 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.62 | 43.0 | 4.67e-01 | 88.0% | 85.7% |
| 3182958 | 101.1.1.64 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 | 0.61 | 56.0 | 4.73e-01 | 100.0% | 65.9% |
| 3716640 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.61 | 49.0 | 3.76e-01 | 86.7% | 91.1% |
| 3787293 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.61 | 47.0 | 4.15e-01 | 83.1% | 72.0% |
| 4033888 | 101.1.1.489 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF722 | 0.60 | 55.0 | 4.68e-01 | 98.8% | 97.7% |
| 3695966 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.60 | 48.0 | 3.58e-01 | 85.5% | 64.4% |
| 4021491 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 48.0 | 3.70e-01 | 86.7% | 71.7% |
| 3886097 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 49.0 | 5.16e-01 | 89.2% | 97.3% |
| 3718570 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.59 | 48.0 | 4.14e-01 | 92.8% | 58.4% |
| 3173775 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.58 | 49.0 | 3.75e-01 | 92.8% | 87.2% |
| 3974118 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 53.0 | 5.20e-01 | 100.0% | 95.6% |
| 3460685 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.57 | 48.0 | 3.76e-01 | 94.0% | 48.9% |
| 3254469 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.56 | 47.0 | 3.68e-01 | 94.0% | 42.8% |
| 3711347 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.54 | 47.0 | 3.95e-01 | 95.2% | 57.9% |
| 4939861 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.54 | 41.0 | 2.99e-01 | 85.5% | 90.7% |
| 3603203 | 5067.1.1.12 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › UPF0014 | 0.51 | 37.0 | 2.69e-01 | 77.1% | 75.2% |