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NC_017976.1__YP_006383495.1__PBC1_gp42__00042

Bact-Vir

NC_017976.1__YP_006383495.1__PBC1_gp42__00042

Identity

Accession:
NC_017976 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 153-217
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4houB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 35.0 2.39e-01 84.6% 14.9%
3dewA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 33.0 3.66e-01 92.3% 80.8%
4lg3A02 6.10.20.130 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.51 32.0 3.52e-01 95.4% 95.3%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.51 44.0 3.52e-01 100.0% 59.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939644 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 39.0 2.75e-01 96.9% 21.7%
3844296 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 38.0 2.83e-01 86.2% 77.6%
3942057 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.51 37.0 3.99e-01 96.9% 92.7%
D2 medium residues 52-142
PDB
Domain cluster: representative