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NC_017976.1__YP_006383495.1__PBC1_gp42__00042
Bact-VirNC_017976.1__YP_006383495.1__PBC1_gp42__00042
Identity
- Accession:
- NC_017976 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 1161901
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 153-217
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4houB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 35.0 | 2.39e-01 | 84.6% | 14.9% |
| 3dewA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 33.0 | 3.66e-01 | 92.3% | 80.8% |
| 4lg3A02 | 6.10.20.130 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.51 | 32.0 | 3.52e-01 | 95.4% | 95.3% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.51 | 44.0 | 3.52e-01 | 100.0% | 59.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939644 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 39.0 | 2.75e-01 | 96.9% | 21.7% |
| 3844296 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.83e-01 | 86.2% | 77.6% |
| 3942057 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.51 | 37.0 | 3.99e-01 | 96.9% | 92.7% |
D2
medium
residues 52-142
Domain cluster:
representative