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NC_018087.3__YP_006488891.1__ZZ1p0082__00082
Bact-VirNC_018087.3__YP_006488891.1__ZZ1p0082__00082
Identity
- Accession:
- NC_018087 ↗
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Zedzedvirus›
Acinetobacter_phage_ZZ1
TaxID: 1049283
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-83
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.79 | 55.0 | 4.48e-01 | 96.1% | 41.4% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 52.0 | 4.59e-01 | 76.6% | 74.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 4.71e-01 | 77.9% | 61.8% |
| 4kn7D01 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.68 | 49.0 | 4.11e-01 | 76.6% | 44.4% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 42.0 | 3.07e-01 | 100.0% | 24.0% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 39.0 | 2.84e-01 | 83.1% | 24.5% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 3.85e-01 | 77.9% | 94.3% |
| 6zd1A01 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.52 | 37.0 | 2.91e-01 | 75.3% | 40.1% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.51 | 35.0 | 2.98e-01 | 71.4% | 46.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050894 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.79 | 54.0 | 3.75e-01 | 71.4% | 88.7% |
| 3257074 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.77 | 58.0 | 3.77e-01 | 77.9% | 21.0% |
| 3417201 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.75 | 57.0 | 4.36e-01 | 81.8% | 37.7% |
| 3718200 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 52.0 | 4.40e-01 | 76.6% | 72.8% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.69 | 52.0 | 4.49e-01 | 79.2% | 69.6% |
| 4902520 | 5073.1.1.12 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.65 | 54.0 | 3.39e-01 | 89.6% | 59.9% |
| 4888097 | 5073.1.1.12 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.60 | 55.0 | 3.40e-01 | 100.0% | 36.4% |
| 3991465 | 304.28.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched | 0.60 | 45.0 | 2.62e-01 | 100.0% | 7.9% |
| 4800170 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 43.0 | 3.89e-01 | 77.9% | 69.5% |
| 3465965 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 48.0 | 3.02e-01 | 93.5% | 72.0% |
| 3932224 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 50.0 | 3.36e-01 | 98.7% | 35.2% |
| 3466671 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.55 | 42.0 | 2.84e-01 | 84.4% | 47.5% |
| 3377432 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.55 | 39.0 | 2.42e-01 | 75.3% | 34.9% |
| 3817779 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.55 | 39.0 | 2.66e-01 | 76.6% | 56.8% |
| 3804360 | 109.4.1.1331 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif | 0.53 | 44.0 | 3.02e-01 | 93.5% | 52.4% |
| 3809404 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.52 | 42.0 | 2.60e-01 | 96.1% | 33.2% |
| 3338123 | 109.4.1.1335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif | 0.52 | 42.0 | 2.61e-01 | 93.5% | 29.8% |