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NC_018087.3__YP_006488945.1__ZZ1p0045__00045

Bact-Vir

NC_018087.3__YP_006488945.1__ZZ1p0045__00045

Identity

Accession:
NC_018087 ↗
Kingdom:
phage

Quality

68.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-100
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 45.0 4.22e-01 93.4% 75.6%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.54 30.0 3.47e-01 100.0% 82.1%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 41.0 3.92e-01 84.6% 96.3%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.21e-01 89.0% 39.9%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.19e-01 95.6% 37.5%
2xigA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.51 27.0 3.27e-01 100.0% 81.8%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 40.0 4.21e-01 100.0% 97.5%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 42.0 3.87e-01 94.5% 71.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4011093 319.1.1.14 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HECT_2 0.56 44.0 4.33e-01 100.0% 79.0%
1866805 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 41.0 4.28e-01 100.0% 91.3%
3786143 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.54 37.0 3.58e-01 71.4% 72.4%
3882539 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 40.0 4.35e-01 98.9% 98.7%
3593085 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 37.0 3.55e-01 71.4% 84.5%
3703836 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.52 36.0 3.36e-01 71.4% 87.0%
3401273 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.52 36.0 3.58e-01 71.4% 80.0%
3685404 11.1.1.233 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_mannosidase 0.50 29.0 3.10e-01 100.0% 64.0%
3253396 868.1.1.2 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase 0.50 42.0 3.27e-01 93.4% 95.6%