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NC_018087.3__YP_006489045.1__ZZ1p0237__00237

Bact-Vir

NC_018087.3__YP_006489045.1__ZZ1p0237__00237

Identity

Accession:
NC_018087 ↗
Kingdom:
phage

Quality

71.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Zedzedvirus› Acinetobacter_phage_ZZ1

TaxID: 1049283

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-97
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10465.17 best Inhibitor_I24 62.6 5.40e-17 100.0% 50.7%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 41.0 4.93e-01 83.9% 98.1%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 45.0 5.05e-01 83.9% 91.0%
3mhxB00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 48.0 4.96e-01 85.1% 80.2%
4c0dC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.66 40.0 3.40e-01 83.9% 38.0%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 42.0 4.49e-01 83.9% 77.6%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 38.0 4.28e-01 83.9% 80.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 39.0 4.44e-01 83.9% 85.7%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 39.0 3.04e-01 85.1% 29.8%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 38.0 4.06e-01 83.9% 80.8%
3d54D00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.55 45.0 3.51e-01 94.3% 77.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.86e-01 83.9% 78.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 36.0 3.80e-01 85.1% 78.7%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.53 40.0 3.85e-01 95.4% 69.2%
4ifdI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 35.0 3.07e-01 71.3% 45.8%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 33.0 3.61e-01 83.9% 80.0%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 37.0 3.22e-01 75.9% 91.4%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 32.0 3.68e-01 83.9% 91.5%
1s2kA00 2.60.120.700 Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 0.52 43.0 3.36e-01 93.1% 87.4%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.51 32.0 3.77e-01 96.6% 98.2%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 35.0 3.43e-01 77.0% 66.0%
4dnaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 36.0 2.76e-01 95.4% 30.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 42.0 4.96e-01 83.9% 85.0%
4975478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.68 52.0 5.29e-01 83.9% 83.5%
3500542 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 40.0 3.95e-01 83.9% 55.6%
4542692 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.57e-01 83.9% 70.6%
139681 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 49.0 4.94e-01 85.1% 80.0%
3797477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.91e-01 83.9% 93.8%
4250193 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.61 42.0 4.18e-01 83.9% 67.8%
3940730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 38.0 3.74e-01 85.1% 56.8%
3913579 386.1.1.279 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27065 0.61 31.0 3.77e-01 77.0% 76.4%
4427477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 3.74e-01 85.1% 60.0%
None — 0.57 48.0 3.16e-01 95.4% 84.9%
4983672 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.56 47.0 3.00e-01 95.4% 62.4%
4055974 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.55 47.0 4.15e-01 92.0% 66.4%
4992899 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 45.0 2.70e-01 93.1% 39.2%
4020992 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 43.0 2.88e-01 85.1% 25.8%
3657257 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.55 42.0 3.66e-01 85.1% 95.0%
3496645 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 46.0 2.84e-01 97.7% 42.9%
4978295 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 46.0 2.91e-01 96.6% 62.0%
3720660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 36.0 3.89e-01 83.9% 80.0%
1112010 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.54 36.0 3.80e-01 85.1% 78.7%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 3.73e-01 93.1% 66.4%
4998304 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 40.0 2.61e-01 87.4% 33.5%
4935523 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 39.0 3.25e-01 86.2% 91.8%
D2 high residues 101-160
PDB