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NC_018282.1__YP_006561052.1__MP1412_45__00045

Bact-Vir

NC_018282.1__YP_006561052.1__MP1412_45__00045

Identity

Accession:
NC_018282 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-112
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 56.0 4.39e-01 100.0% 88.1%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.61 53.0 4.58e-01 100.0% 86.0%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.60 46.0 3.91e-01 97.8% 49.7%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.45e-01 95.7% 25.4%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 39.0 3.69e-01 95.7% 54.4%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.59 45.0 4.52e-01 100.0% 81.5%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 52.0 4.11e-01 95.7% 85.9%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 51.0 3.63e-01 100.0% 68.9%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 52.0 3.49e-01 100.0% 40.2%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 50.0 3.45e-01 97.8% 70.2%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 51.0 3.56e-01 100.0% 72.2%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 50.0 3.45e-01 98.9% 43.9%
5mqrA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 49.0 3.24e-01 95.7% 30.3%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 3.54e-01 97.8% 40.1%
2qguA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 35.0 3.41e-01 92.4% 54.5%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 51.0 3.58e-01 100.0% 72.9%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 51.0 3.41e-01 100.0% 45.8%
4o4oA00 2.40.128.590 Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain 0.56 50.0 3.93e-01 100.0% 47.2%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 50.0 4.36e-01 100.0% 70.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.56 47.0 3.23e-01 96.7% 54.7%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 49.0 3.28e-01 100.0% 44.8%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 46.0 3.34e-01 94.6% 76.8%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 35.0 3.86e-01 87.0% 83.1%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.81e-01 96.7% 85.3%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 48.0 3.30e-01 98.9% 48.5%
1uv4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 49.0 3.45e-01 100.0% 52.6%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 39.0 3.19e-01 82.6% 41.6%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.70e-01 96.7% 67.3%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.53 45.0 4.03e-01 96.7% 86.8%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.45e-01 79.3% 58.6%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.53 47.0 3.02e-01 100.0% 25.9%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.52 41.0 3.70e-01 83.7% 85.5%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 46.0 3.24e-01 100.0% 85.4%
1e2rA02 2.140.10.20 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.52 45.0 2.96e-01 100.0% 30.3%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 3.29e-01 100.0% 70.3%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 37.0 3.31e-01 97.8% 50.7%
3g0kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 41.0 3.67e-01 88.0% 83.6%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965134 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.70 46.0 4.25e-01 84.8% 53.0%
3428912 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.70 51.0 3.45e-01 97.8% 21.0%
5025792 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.69 50.0 4.65e-01 100.0% 60.0%
3559516 391.1.1.28 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › CHRDL_1_2_C 0.68 43.0 4.22e-01 87.0% 59.0%
5038627 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.65 59.0 3.97e-01 98.9% 91.1%
3695698 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.65 47.0 4.10e-01 100.0% 50.0%
3941306 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.64 49.0 3.30e-01 81.5% 48.7%
2410020 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.63 49.0 4.23e-01 98.9% 52.0%
3382673 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.63 55.0 3.78e-01 94.6% 29.5%
3198523 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.63 53.0 3.50e-01 94.6% 41.2%
3928508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 55.0 3.66e-01 95.7% 41.4%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.62 48.0 5.07e-01 94.6% 95.0%
3573723 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.62 56.0 3.48e-01 100.0% 28.9%
3938164 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 41.0 4.76e-01 83.7% 95.4%
3622698 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 53.0 3.62e-01 95.7% 45.0%
4112562 5.1.4.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › T4P_PilY1 0.61 53.0 3.25e-01 95.7% 26.8%
3168944 5.1.4.97 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.61 52.0 3.38e-01 93.5% 89.5%
3444104 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 54.0 3.73e-01 100.0% 49.4%
3330702 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 54.0 3.72e-01 100.0% 48.6%
4927376 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 55.0 3.70e-01 100.0% 44.6%
4958640 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.60 45.0 3.59e-01 78.3% 87.9%
3691934 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 54.0 3.39e-01 100.0% 35.3%
3816749 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.60 53.0 3.65e-01 98.9% 39.1%
3323788 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 53.0 3.62e-01 96.7% 31.5%
3316054 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.18e-01 90.2% 23.1%
4014670 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.59 52.0 4.45e-01 98.9% 83.3%
3309307 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 50.0 2.98e-01 92.4% 14.2%
3963175 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.59 53.0 4.22e-01 100.0% 81.6%
3803981 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.58 39.0 3.35e-01 87.0% 42.8%
3271023 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.58 48.0 3.89e-01 89.1% 83.7%
4952360 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.58 54.0 3.35e-01 97.8% 26.4%
4010371 295.1.1.45 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF30238 0.58 49.0 4.90e-01 94.6% 100.0%
2771632 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.58 51.0 4.04e-01 97.8% 75.1%
3797033 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.58 47.0 3.93e-01 87.0% 51.6%
5036205 2004.1.1.348 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B 0.58 52.0 3.03e-01 97.8% 15.7%
4026437 5.1.3.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA 0.57 50.0 3.40e-01 94.6% 29.2%
4373556 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.57 50.0 3.99e-01 97.8% 75.3%
4102119 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.57 50.0 3.22e-01 96.7% 34.7%
5054861 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.57 52.0 3.24e-01 97.8% 24.7%
3512529 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.57 49.0 4.12e-01 96.7% 76.9%
137372 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.57 51.0 3.58e-01 100.0% 72.9%
3275758 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 50.0 3.14e-01 98.9% 37.0%
3797628 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.56 51.0 4.53e-01 100.0% 86.9%
3785596 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.56 49.0 4.11e-01 98.9% 72.7%
5042975 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.56 51.0 3.94e-01 97.8% 61.0%
3932499 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.56 51.0 3.32e-01 98.9% 46.2%
3299711 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.56 49.0 4.32e-01 97.8% 74.8%
3242777 3459.1.1.2 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF4773 0.56 50.0 4.61e-01 98.9% 81.5%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.56 43.0 4.13e-01 95.7% 71.2%
3821398 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 49.0 3.44e-01 98.9% 41.0%
3802525 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 43.0 2.99e-01 85.9% 42.7%
3361969 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 48.0 3.40e-01 100.0% 38.7%
3241390 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 48.0 4.04e-01 100.0% 78.8%
3811378 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 47.0 3.25e-01 98.9% 38.0%
3218185 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.13e-01 80.4% 55.8%
3478979 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 49.0 4.37e-01 100.0% 86.2%
3597681 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.54 47.0 3.26e-01 100.0% 49.3%
3213871 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 2.90e-01 94.6% 23.2%
3833804 5.1.2.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › GINT1_N 0.53 46.0 3.17e-01 96.7% 42.6%
3740914 5.1.4.80 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.53 46.0 3.13e-01 98.9% 36.4%
4975739 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 48.0 3.09e-01 97.8% 29.5%
4666811 243.3.1.51 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › HalC8_like_N 0.52 42.0 3.61e-01 94.6% 55.2%
4846898 12.3.1.5 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.52 44.0 3.38e-01 94.6% 87.4%
2321284 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 42.0 3.98e-01 98.9% 72.8%
5037445 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 39.0 2.86e-01 81.5% 38.8%
5049570 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 37.0 2.82e-01 79.3% 36.1%
3490071 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.50 44.0 3.27e-01 96.7% 56.2%