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NC_018454.1__YP_006590045.1__B887_gp40__00040
Bact-VirNC_018454.1__YP_006590045.1__B887_gp40__00040
Identity
- Accession:
- NC_018454 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-98
Domain cluster:
rep: OK258140.1__UGL61425.1__X__00051__D11-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08748.18 best | Phage_TAC_4 | 65.1 | 1.00e-17 | 100.0% | 82.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hl8A03 | 1.20.1280.70 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exonuclease ExoI, domain 3 | 0.57 | 34.0 | 3.86e-01 | 94.0% | 80.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 34.0 | 3.53e-01 | 97.6% | 65.8% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 39.0 | 3.96e-01 | 90.4% | 76.5% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.53 | 35.0 | 3.46e-01 | 100.0% | 62.0% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.35e-01 | 100.0% | 60.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.70 | 61.0 | 5.75e-01 | 97.6% | 100.0% |
| 3586672 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.62 | 55.0 | 5.13e-01 | 100.0% | 83.8% |
| 5032585 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.54 | 44.0 | 3.31e-01 | 94.0% | 95.2% |
| 3511169 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 35.0 | 3.48e-01 | 100.0% | 70.6% |