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NC_018843.1__YP_006906717.1__SSU5_085__00085
Bact-VirNC_018843.1__YP_006906717.1__SSU5_085__00085
Identity
- Accession:
- NC_018843 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-66
Domain cluster:
rep: NC_034248.1__YP_009352344.1__B7L88_gp157__00087__D14-81
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.87 | 58.0 | 5.82e-01 | 70.0% | 67.7% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.85 | 78.0 | 6.25e-01 | 100.0% | 73.5% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 62.0 | 6.27e-01 | 76.7% | 76.7% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 61.0 | 4.49e-01 | 78.3% | 46.9% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.81 | 73.0 | 5.92e-01 | 100.0% | 89.0% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.81 | 73.0 | 5.81e-01 | 100.0% | 88.0% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.80 | 66.0 | 6.75e-01 | 100.0% | 96.5% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 53.0 | 5.24e-01 | 73.3% | 69.2% |
| 4dmbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.77 | 64.0 | 4.48e-01 | 100.0% | 29.5% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.76 | 64.0 | 4.70e-01 | 93.3% | 37.8% |
| 6ljaA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.76 | 66.0 | 4.07e-01 | 100.0% | 18.9% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 59.0 | 4.81e-01 | 93.3% | 45.2% |
| 5uh5D02 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.75 | 64.0 | 4.80e-01 | 91.7% | 69.6% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 64.0 | 4.69e-01 | 100.0% | 77.1% |
| 2fe1A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.75 | 56.0 | 4.27e-01 | 78.3% | 58.5% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.75 | 53.0 | 5.12e-01 | 75.0% | 69.1% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 51.0 | 4.69e-01 | 76.7% | 55.1% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 63.0 | 5.50e-01 | 95.0% | 92.2% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.74 | 64.0 | 5.18e-01 | 100.0% | 83.2% |
| 2o5iN07 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.74 | 66.0 | 5.19e-01 | 96.7% | 83.6% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.73 | 61.0 | 6.21e-01 | 100.0% | 100.0% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.73 | 52.0 | 3.50e-01 | 76.7% | 24.2% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 61.0 | 4.58e-01 | 100.0% | 77.9% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 53.0 | 4.11e-01 | 95.0% | 34.3% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.72 | 54.0 | 5.02e-01 | 93.3% | 64.0% |
| 4hn9A02 | 1.20.58.2180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 49.0 | 4.76e-01 | 71.7% | 98.5% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 51.0 | 4.86e-01 | 76.7% | 65.3% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 52.0 | 5.22e-01 | 88.3% | 77.0% |
| 2cazE00 | 1.20.1440.200 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Vps28 N-terminal domain | 0.71 | 62.0 | 5.26e-01 | 100.0% | 84.2% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.71 | 55.0 | 5.47e-01 | 98.3% | 79.4% |
| 2pftA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.71 | 59.0 | 3.53e-01 | 100.0% | 25.8% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 59.0 | 5.54e-01 | 100.0% | 81.3% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 62.0 | 4.40e-01 | 100.0% | 51.7% |
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.69 | 60.0 | 4.42e-01 | 98.3% | 52.2% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.68 | 51.0 | 4.35e-01 | 90.0% | 48.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.68 | 48.0 | 3.94e-01 | 76.7% | 40.9% |
| 3ly7A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 57.0 | 4.25e-01 | 100.0% | 36.6% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.67 | 48.0 | 4.25e-01 | 78.3% | 53.3% |
| 3sz7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 51.0 | 3.92e-01 | 100.0% | 35.1% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 48.0 | 5.03e-01 | 85.0% | 96.0% |
| 4f5cA04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.66 | 53.0 | 3.35e-01 | 98.3% | 16.6% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 47.0 | 4.41e-01 | 85.0% | 60.8% |
| 5xtck00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 55.0 | 4.67e-01 | 93.3% | 69.1% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.64 | 57.0 | 3.91e-01 | 100.0% | 41.8% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 47.0 | 4.58e-01 | 81.7% | 71.0% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 46.0 | 4.14e-01 | 76.7% | 57.1% |
| 3o60A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 55.0 | 3.96e-01 | 98.3% | 62.1% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 55.0 | 5.01e-01 | 100.0% | 91.7% |
| 3p5jB02 | 1.10.20.120 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.62 | 50.0 | 4.31e-01 | 88.3% | 56.2% |
| 3anpB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 53.0 | 3.79e-01 | 100.0% | 41.2% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 50.0 | 3.55e-01 | 100.0% | 91.7% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.58 | 48.0 | 3.77e-01 | 93.3% | 50.4% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 48.0 | 3.87e-01 | 98.3% | 86.3% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 47.0 | 3.92e-01 | 96.7% | 59.8% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 48.0 | 4.18e-01 | 96.7% | 68.9% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 46.0 | 3.66e-01 | 98.3% | 90.1% |
| 1gkuB05 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.49e-01 | 91.7% | 49.6% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4620052 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.94 | 68.0 | 4.04e-01 | 75.0% | 12.6% |
| 4989349 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.94 | 75.0 | 7.53e-01 | 95.0% | 83.3% |
| None | — | 0.93 | 66.0 | 4.09e-01 | 73.3% | 16.1% | |
| 3798302 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.93 | 66.0 | 6.19e-01 | 73.3% | 62.9% |
| 3742303 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.91 | 64.0 | 4.33e-01 | 73.3% | 23.2% |
| 4994339 | 601.5.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein | 0.90 | 80.0 | 7.55e-01 | 95.0% | 81.4% |
| 4076608 | 109.4.1.924 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH | 0.90 | 63.0 | 3.91e-01 | 73.3% | 15.3% |
| 3725377 | 192.15.1.44 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF6604 | 0.88 | 63.0 | 5.40e-01 | 75.0% | 50.0% |
| 5066143 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.85 | 60.0 | 5.50e-01 | 73.3% | 61.3% |
| 3374816 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.85 | 61.0 | 4.24e-01 | 76.7% | 25.4% |
| 4008053 | 4168.1.1.7 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 | 0.84 | 61.0 | 4.35e-01 | 76.7% | 27.9% |
| 5082279 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.83 | 74.0 | 5.89e-01 | 100.0% | 65.0% |
| 3511170 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.82 | 72.0 | 6.69e-01 | 100.0% | 77.3% |
| 3397047 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.82 | 74.0 | 5.74e-01 | 100.0% | 83.2% |
| 4942387 | 632.7.1.66 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › DUF2304 | 0.82 | 59.0 | 4.79e-01 | 76.7% | 41.8% |
| 4018207 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.82 | 74.0 | 5.30e-01 | 100.0% | 62.4% |
| 4971843 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.81 | 71.0 | 6.26e-01 | 100.0% | 86.5% |
| 3575213 | 109.4.1.649 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 | 0.81 | 68.0 | 5.16e-01 | 96.7% | 40.0% |
| 3737310 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.80 | 62.0 | 5.89e-01 | 98.3% | 70.0% |
| 3400447 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 71.0 | 4.78e-01 | 100.0% | 35.4% |
| 3704408 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 67.0 | 4.48e-01 | 100.0% | 24.2% |
| 3186807 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.80 | 62.0 | 5.19e-01 | 98.3% | 51.6% |
| 4944037 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.79 | 73.0 | 5.24e-01 | 98.3% | 58.7% |
| 3605793 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.78 | 69.0 | 6.41e-01 | 100.0% | 84.0% |
| 4513601 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.78 | 67.0 | 3.82e-01 | 91.7% | 18.3% |
| 3901917 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.78 | 69.0 | 6.58e-01 | 100.0% | 88.6% |
| 5080738 | 192.15.1.47 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GvpK | 0.78 | 62.0 | 5.52e-01 | 86.7% | 80.0% |
| 3814902 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.77 | 61.0 | 5.61e-01 | 98.3% | 66.7% |
| 4357137 | 4958.1.1.1 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 0.77 | 66.0 | 4.53e-01 | 91.7% | 63.8% |
| 3782991 | 109.4.1.934 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ATR | 0.77 | 61.0 | 4.18e-01 | 96.7% | 25.4% |
| 3855777 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.77 | 65.0 | 3.98e-01 | 100.0% | 15.6% |
| 3340051 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.77 | 58.0 | 5.24e-01 | 93.3% | 60.0% |
| 4642508 | 4958.1.1.1 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 0.77 | 66.0 | 4.22e-01 | 91.7% | 38.4% |
| 3995294 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.77 | 66.0 | 5.14e-01 | 95.0% | 64.8% |
| 4298800 | 4958.1.1.1 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 0.76 | 65.0 | 4.20e-01 | 91.7% | 39.6% |
| 5067071 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.76 | 67.0 | 6.52e-01 | 96.7% | 95.4% |
| 3638091 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 69.0 | 4.24e-01 | 100.0% | 19.7% |
| 5049361 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.75 | 65.0 | 5.94e-01 | 98.3% | 96.2% |
| 3214130 | 604.5.1.76 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ICAT | 0.75 | 61.0 | 4.63e-01 | 96.7% | 38.6% |
| 3737309 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.75 | 58.0 | 5.68e-01 | 98.3% | 76.9% |
| 3821280 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.74 | 61.0 | 5.73e-01 | 100.0% | 74.3% |
| 4133287 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.73 | 54.0 | 3.74e-01 | 78.3% | 73.6% |
| 3928104 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.73 | 52.0 | 3.67e-01 | 75.0% | 25.0% |
| 3485513 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 63.0 | 4.59e-01 | 100.0% | 41.7% |
| 3959563 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.73 | 65.0 | 4.27e-01 | 96.7% | 40.0% |
| 3372974 | 3684.1.1.2 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 | 0.71 | 60.0 | 4.01e-01 | 100.0% | 51.9% |
| 4999109 | 109.4.1.3068 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2225 | 0.71 | 58.0 | 4.11e-01 | 96.7% | 28.5% |
| 4934678 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.70 | 63.0 | 4.45e-01 | 100.0% | 81.7% |
| 4142346 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.70 | 51.0 | 4.18e-01 | 78.3% | 50.0% |
| 3273488 | 109.4.1.3298 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HDS, Sec7-like_HUS, Mon2_C | 0.70 | 60.0 | 3.33e-01 | 100.0% | 6.9% |
| 3932265 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.68 | 55.0 | 4.65e-01 | 91.7% | 76.2% |
| 3270221 | 109.24.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_C | 0.68 | 57.0 | 4.64e-01 | 100.0% | 71.2% |
| 3764093 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.66 | 57.0 | 4.97e-01 | 100.0% | 82.1% |
| 3902100 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.65 | 46.0 | 4.21e-01 | 78.3% | 76.5% |
| 3530149 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.64 | 56.0 | 4.57e-01 | 100.0% | 66.1% |
| 3221606 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 52.0 | 4.38e-01 | 93.3% | 89.5% |
| 3311421 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.62 | 50.0 | 3.55e-01 | 100.0% | 38.3% |
| 2992201 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.61 | 53.0 | 4.43e-01 | 100.0% | 70.0% |
| 3276259 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.61 | 51.0 | 3.45e-01 | 100.0% | 71.3% |
| 3643885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 47.0 | 4.53e-01 | 91.7% | 85.7% |
| 3694308 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.56 | 47.0 | 2.84e-01 | 98.3% | 36.8% |
D2
high
residues 77-138
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.87 | 81.0 | 7.55e-01 | 100.0% | 87.8% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.81 | 63.0 | 5.50e-01 | 88.7% | 57.3% |
| 3odtA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 54.0 | 3.41e-01 | 93.5% | 15.9% |
| 4lg8A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 55.0 | 3.48e-01 | 96.8% | 15.8% |
| 1gxrA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 54.0 | 3.38e-01 | 95.2% | 14.3% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 56.0 | 3.53e-01 | 93.5% | 16.5% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 56.0 | 3.49e-01 | 95.2% | 15.5% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 54.0 | 4.58e-01 | 88.7% | 47.1% |
| 2wl1A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.73 | 66.0 | 4.61e-01 | 100.0% | 61.8% |
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.73 | 66.0 | 4.69e-01 | 100.0% | 63.7% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.73 | 54.0 | 3.30e-01 | 96.8% | 13.3% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 57.0 | 4.64e-01 | 93.5% | 44.6% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 52.0 | 4.62e-01 | 90.3% | 52.2% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 57.0 | 4.52e-01 | 85.5% | 50.8% |
| 4aezA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.72 | 55.0 | 3.46e-01 | 95.2% | 15.6% |
| 7qryB01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.72 | 64.0 | 4.79e-01 | 100.0% | 70.6% |
| 4u7aA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.72 | 54.0 | 3.31e-01 | 95.2% | 14.0% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.72 | 53.0 | 3.30e-01 | 95.2% | 14.6% |
| 6fcvB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 53.0 | 3.28e-01 | 95.2% | 13.7% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 54.0 | 3.38e-01 | 96.8% | 15.1% |
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 54.0 | 3.33e-01 | 95.2% | 14.6% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 53.0 | 3.38e-01 | 95.2% | 16.6% |
| 2cnxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 51.0 | 3.25e-01 | 93.5% | 16.3% |
| 1wiiA01 | 2.20.25.190 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 50.0 | 5.04e-01 | 83.9% | 79.0% |
| 4lg9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 56.0 | 3.50e-01 | 96.8% | 16.6% |
| 3wyfE00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 49.0 | 3.70e-01 | 83.9% | 33.8% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.67 | 61.0 | 3.82e-01 | 100.0% | 92.2% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.66 | 42.0 | 3.63e-01 | 93.5% | 43.0% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 55.0 | 3.45e-01 | 93.5% | 30.3% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 55.0 | 3.44e-01 | 91.9% | 27.1% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.65 | 58.0 | 3.61e-01 | 100.0% | 86.0% |
| 1kb0A01 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.65 | 51.0 | 2.97e-01 | 87.1% | 26.3% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.65 | 42.0 | 3.64e-01 | 93.5% | 44.6% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 54.0 | 3.37e-01 | 91.9% | 30.4% |
| 3ei3B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 53.0 | 3.37e-01 | 95.2% | 17.7% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.64 | 48.0 | 3.07e-01 | 98.4% | 15.9% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 48.0 | 3.08e-01 | 95.2% | 15.8% |
| 4mp8A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.63 | 50.0 | 3.71e-01 | 87.1% | 50.3% |
| 1x49A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 46.0 | 4.49e-01 | 79.0% | 74.3% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 51.0 | 3.28e-01 | 91.9% | 18.6% |
| 1w97L01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.63 | 49.0 | 3.68e-01 | 85.5% | 78.6% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.62 | 56.0 | 3.35e-01 | 100.0% | 50.7% |
| 5c2vB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.43e-01 | 100.0% | 88.4% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.50e-01 | 100.0% | 71.3% |
| 1l0qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.51e-01 | 100.0% | 43.2% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 53.0 | 3.52e-01 | 98.4% | 84.4% |
| 3jb9K01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 54.0 | 3.48e-01 | 100.0% | 74.6% |
| 1c5kA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 53.0 | 3.51e-01 | 100.0% | 84.6% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 54.0 | 3.40e-01 | 100.0% | 74.9% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 54.0 | 4.26e-01 | 96.8% | 92.7% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.61 | 50.0 | 3.19e-01 | 96.8% | 20.1% |
| 2i99A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.60 | 48.0 | 3.67e-01 | 88.7% | 52.7% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 50.0 | 3.19e-01 | 93.5% | 100.0% |
| 1a0rB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 52.0 | 3.30e-01 | 100.0% | 77.0% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.60 | 49.0 | 3.20e-01 | 93.5% | 20.2% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 52.0 | 3.25e-01 | 100.0% | 66.6% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.59 | 47.0 | 3.60e-01 | 88.7% | 51.0% |
| 2dlxA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 44.0 | 3.72e-01 | 85.5% | 87.6% |
| 3ly7A01 | 3.40.50.11830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 46.0 | 3.50e-01 | 91.9% | 74.5% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.58 | 47.0 | 4.17e-01 | 96.8% | 62.2% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 50.0 | 4.30e-01 | 100.0% | 85.3% |
| 1qxmA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 50.0 | 3.85e-01 | 100.0% | 94.5% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 47.0 | 3.90e-01 | 100.0% | 94.5% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.56 | 49.0 | 3.16e-01 | 100.0% | 74.0% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.56 | 46.0 | 4.20e-01 | 98.4% | 88.9% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 46.0 | 3.40e-01 | 91.9% | 42.2% |
| 2rsmA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 3.48e-01 | 83.9% | 47.8% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.54 | 44.0 | 3.58e-01 | 90.3% | 47.5% |
| 4e6xB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 43.0 | 2.84e-01 | 95.2% | 19.3% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.53 | 44.0 | 2.93e-01 | 91.9% | 35.5% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 45.0 | 3.09e-01 | 96.8% | 26.5% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.45e-01 | 95.2% | 95.0% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3413965 | 5.1.4.463 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_NWD2_C | 0.79 | 58.0 | 3.45e-01 | 96.8% | 11.7% |
| 3898218 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.76 | 60.0 | 4.30e-01 | 85.5% | 34.3% |
| 3412604 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.76 | 61.0 | 3.74e-01 | 96.8% | 15.5% |
| 3786743 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.76 | 64.0 | 4.19e-01 | 93.5% | 22.7% |
| 3620132 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.74 | 58.0 | 3.53e-01 | 96.8% | 13.2% |
| 3916979 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.74 | 67.0 | 4.67e-01 | 100.0% | 60.0% |
| 3373744 | 5.1.4.241 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › eIF2A | 0.74 | 55.0 | 3.29e-01 | 95.2% | 11.5% |
| 3659251 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.73 | 59.0 | 3.80e-01 | 93.5% | 19.6% |
| 3902278 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.73 | 58.0 | 3.60e-01 | 91.9% | 15.4% |
| None | — | 0.73 | 56.0 | 3.47e-01 | 96.8% | 15.0% | |
| 3865427 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.73 | 65.0 | 4.51e-01 | 100.0% | 65.5% |
| 3545141 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.72 | 58.0 | 3.55e-01 | 91.9% | 14.4% |
| 3564353 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.72 | 65.0 | 4.57e-01 | 100.0% | 61.1% |
| 3499167 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 53.0 | 3.29e-01 | 95.2% | 14.0% |
| 3268906 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.72 | 51.0 | 4.59e-01 | 96.8% | 52.8% |
| 3877628 | 5.1.5.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 | 0.72 | 59.0 | 3.67e-01 | 95.2% | 16.0% |
| 3652949 | 5.1.5.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 | 0.72 | 55.0 | 3.54e-01 | 95.2% | 17.3% |
| 3874219 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.72 | 59.0 | 3.62e-01 | 95.2% | 15.6% |
| 3379168 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.71 | 55.0 | 5.52e-01 | 88.7% | 82.5% |
| 3532938 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.71 | 61.0 | 3.76e-01 | 95.2% | 40.0% |
| 3275844 | 5.1.4.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N | 0.71 | 61.0 | 3.69e-01 | 93.5% | 18.7% |
| 3781230 | 1013.1.1.1 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › DUF3337 | 0.71 | 60.0 | 4.16e-01 | 100.0% | 28.1% |
| 3576373 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 59.0 | 3.59e-01 | 91.9% | 24.8% |
| 3168104 | 5.1.5.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C | 0.70 | 57.0 | 3.21e-01 | 88.7% | 20.0% |
| 3925878 | 5.1.4.362 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_VPS8 | 0.70 | 53.0 | 3.27e-01 | 93.5% | 14.1% |
| 3241191 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 53.0 | 4.35e-01 | 91.9% | 44.3% |
| 3850704 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.69 | 52.0 | 3.32e-01 | 95.2% | 15.9% |
| 3400449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 50.0 | 3.62e-01 | 82.3% | 27.4% |
| 4945596 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.69 | 47.0 | 5.39e-01 | 95.2% | 97.8% |
| 3781083 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.68 | 52.0 | 3.09e-01 | 91.9% | 10.6% |
| 3176830 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 53.0 | 4.47e-01 | 90.3% | 49.1% |
| 3734423 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 59.0 | 3.58e-01 | 96.8% | 15.6% |
| 3605776 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.68 | 56.0 | 3.33e-01 | 91.9% | 31.9% |
| 3613101 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 56.0 | 3.34e-01 | 91.9% | 32.6% |
| 3849084 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.68 | 58.0 | 3.41e-01 | 93.5% | 20.9% |
| 3936138 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 57.0 | 3.47e-01 | 91.9% | 24.7% |
| 3484746 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.67 | 47.0 | 3.83e-01 | 72.6% | 93.6% |
| 3850746 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.67 | 53.0 | 3.16e-01 | 96.8% | 12.1% |
| 3179728 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 57.0 | 3.53e-01 | 96.8% | 24.3% |
| 3272228 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 60.0 | 3.85e-01 | 100.0% | 87.0% |
| 3425770 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 52.0 | 2.88e-01 | 95.2% | 6.4% |
| 3303191 | 5.1.5.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 | 0.67 | 59.0 | 3.61e-01 | 100.0% | 69.2% |
| 3190113 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 54.0 | 3.42e-01 | 96.8% | 18.0% |
| 3416404 | 5.1.4.240 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MRJP | 0.66 | 60.0 | 3.67e-01 | 100.0% | 30.3% |
| 3915194 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 56.0 | 3.44e-01 | 93.5% | 18.1% |
| 3973152 | 5.1.5.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Cytochrom_D1 | 0.66 | 59.0 | 3.56e-01 | 100.0% | 36.6% |
| 3605436 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 55.0 | 4.19e-01 | 91.9% | 64.1% |
| 3709124 | 5.1.5.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N | 0.66 | 59.0 | 3.46e-01 | 100.0% | 19.4% |
| 3601837 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 58.0 | 3.45e-01 | 100.0% | 85.1% |
| 3440815 | 5.1.11.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_AT5G49610-like | 0.65 | 54.0 | 3.37e-01 | 91.9% | 34.1% |
| 3552674 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.65 | 52.0 | 3.34e-01 | 95.2% | 18.3% |
| 3364229 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.64 | 56.0 | 3.60e-01 | 100.0% | 84.7% |
| 5039064 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 55.0 | 3.40e-01 | 100.0% | 77.4% |
| None | — | 0.64 | 56.0 | 3.40e-01 | 98.4% | 32.0% | |
| 3520914 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.64 | 55.0 | 3.03e-01 | 100.0% | 9.0% |
| 4569717 | 5.1.5.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Cytochrom_D1 | 0.63 | 56.0 | 3.36e-01 | 100.0% | 72.7% |
| 3477236 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.63 | 54.0 | 3.00e-01 | 98.4% | 42.5% |
| 4028948 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 56.0 | 3.36e-01 | 98.4% | 21.9% |
| 3916724 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.63 | 54.0 | 3.22e-01 | 96.8% | 18.0% |
| 3621260 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 55.0 | 3.27e-01 | 98.4% | 75.9% |
| 3743929 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 52.0 | 3.28e-01 | 96.8% | 17.8% |
| 2225 | 5.1.4.405 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase, YNCE, choice_anch_I | 0.62 | 55.0 | 3.51e-01 | 100.0% | 43.2% |
| 3171382 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.62 | 53.0 | 4.78e-01 | 100.0% | 86.7% |
| 4314668 | 5.1.3.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 | 0.61 | 53.0 | 3.40e-01 | 100.0% | 78.7% |
| 3472515 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.61 | 54.0 | 3.37e-01 | 100.0% | 73.2% |
| 3705941 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 50.0 | 4.72e-01 | 96.8% | 95.0% |
| 3646501 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.61 | 54.0 | 3.47e-01 | 100.0% | 85.1% |
| 3840837 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.61 | 53.0 | 3.44e-01 | 98.4% | 32.3% |
| 3296644 | 5.1.4.266 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT122_1st | 0.61 | 53.0 | 3.38e-01 | 100.0% | 85.9% |
| 3249061 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.61 | 53.0 | 3.35e-01 | 100.0% | 29.4% |
| 4257463 | 4292.1.1.1 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related › FlaG | 0.60 | 47.0 | 4.56e-01 | 95.2% | 76.0% |
| 4002773 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.60 | 53.0 | 3.21e-01 | 100.0% | 47.5% |
| 3221977 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.60 | 51.0 | 3.17e-01 | 96.8% | 19.6% |
| 3518821 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 49.0 | 3.31e-01 | 91.9% | 44.2% |
| 5832 | 4292.1.1.1 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related › FlaG | 0.59 | 50.0 | 4.26e-01 | 98.4% | 56.9% |
| 5047148 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 53.0 | 3.32e-01 | 100.0% | 71.8% |
| 3192402 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 51.0 | 3.81e-01 | 100.0% | 50.9% |
| 4946341 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.58 | 50.0 | 3.29e-01 | 100.0% | 24.1% |
| 5069874 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 51.0 | 3.85e-01 | 100.0% | 56.0% |
| 3388135 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.56 | 45.0 | 4.28e-01 | 91.9% | 76.0% |
| 3507674 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.56 | 46.0 | 2.81e-01 | 96.8% | 14.5% |
| 3929563 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.56 | 48.0 | 3.03e-01 | 100.0% | 71.8% |
| 3970048 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.56 | 44.0 | 4.17e-01 | 91.9% | 73.1% |
| 4319496 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.54 | 40.0 | 3.97e-01 | 85.5% | 81.4% |
| 3485085 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.53 | 42.0 | 3.27e-01 | 96.8% | 36.6% |
| 3478002 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.52 | 43.0 | 2.70e-01 | 98.4% | 15.7% |
| 4020848 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 43.0 | 3.37e-01 | 98.4% | 84.0% |
| 3597992 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.52 | 40.0 | 4.24e-01 | 83.9% | 96.4% |