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NC_018856.1__YP_006907516.1__D307_gp044__00229

Bact-Vir

NC_018856.1__YP_006907516.1__D307_gp044__00229

Identity

Accession:
NC_018856 ↗
Kingdom:
phage

Quality

60.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bastillevirus› Bacillus_phage_Bastille

TaxID: 57477

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-118
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rh3A00 1.10.1220.190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain 0.58 36.0 3.09e-01 94.7% 38.0%
1yavB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.57 46.0 3.90e-01 93.3% 91.1%
2im5A00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.57 42.0 2.74e-01 81.3% 48.3%
1wg4A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 51.0 5.09e-01 97.3% 98.7%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.56 40.0 3.32e-01 76.0% 92.0%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 40.0 3.44e-01 77.3% 80.5%
3ledA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 43.0 3.53e-01 94.7% 99.4%
4evuB00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.53 30.0 3.14e-01 78.7% 61.8%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 37.0 3.18e-01 76.0% 85.3%
4q20A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 35.0 2.86e-01 70.7% 66.4%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.52 40.0 3.92e-01 86.7% 94.0%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 40.0 3.42e-01 90.7% 78.4%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 40.0 3.52e-01 89.3% 84.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4247304 101.1.2.39 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.55 34.0 3.60e-01 86.7% 70.8%
4138083 323.1.1.8 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_cat 0.54 47.0 3.65e-01 100.0% 69.7%
5018045 325.1.4.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Nicotinate/Quinolinate PRTase N-terminal domain-like › NAPRTase_N 0.54 37.0 2.99e-01 73.3% 71.6%
3727976 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 31.0 3.30e-01 92.0% 67.7%
139726 241.1.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.51 37.0 3.16e-01 77.3% 83.5%
3941222 304.9.1.6 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 0.50 45.0 4.09e-01 100.0% 89.0%
3954005 256.1.1.0 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.50 29.0 3.20e-01 80.0% 71.7%
3596087 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.50 35.0 3.20e-01 76.0% 84.5%