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NC_019401.1__YP_006987612.1__GAP32_498__00510

Bact-Vir

NC_019401.1__YP_006987612.1__GAP32_498__00510

Identity

Accession:
NC_019401 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-145
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03013.20 best Pyr_excise 47.5 2.70e-12 59.9% 79.0%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eniA00 1.10.440.10 Mainly Alpha › Orthogonal Bundle › Endonuclease V › T4 endonuclease V 0.96 90.0 9.01e-01 99.3% 94.9%
4adzA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.56 27.0 3.27e-01 91.2% 67.8%
3aqbB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 43.0 3.33e-01 86.9% 82.6%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.51 29.0 3.62e-01 93.4% 90.4%
3ejnA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 3.95e-01 96.4% 67.0%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 27.0 3.31e-01 87.6% 81.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3258 615.1.1.1 alpha arrays › T4 endonuclease V › T4 endonuclease V › T4 endonuclease V › Pyr_excise 0.96 90.0 9.01e-01 99.3% 94.9%
5019065 206.1.1.14 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.53 41.0 2.86e-01 82.5% 63.0%