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NC_019406.1__YP_006988354.1__CcrColossus_gp120__00120

Bact-Vir

NC_019406.1__YP_006988354.1__CcrColossus_gp120__00120

Identity

Accession:
NC_019406 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-142
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09931.16 best Phage_phiJL001_Gp84_N 117.4 9.60e-34 100.0% 75.6%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 39.0 4.62e-01 84.8% 70.1%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 37.0 4.48e-01 83.2% 75.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 44.0 4.49e-01 96.8% 73.0%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 39.0 4.12e-01 84.8% 69.4%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 5.00e-01 96.0% 84.7%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 45.0 4.73e-01 96.0% 83.3%
2m2dA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 42.0 4.30e-01 86.4% 72.9%
1osyA00 2.60.40.1790 Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve 0.61 35.0 3.67e-01 83.2% 61.4%
2w1nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 31.0 3.68e-01 85.6% 73.2%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 30.0 3.35e-01 74.4% 59.2%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.54e-01 95.2% 73.2%
2q3xA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 43.0 4.12e-01 100.0% 67.6%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 41.0 4.08e-01 96.0% 70.8%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 4.65e-01 96.0% 78.5%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 3.67e-01 70.4% 69.5%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 50.0 4.28e-01 96.0% 62.4%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.56 40.0 4.08e-01 88.8% 74.4%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 50.0 4.52e-01 96.0% 73.5%
4dguA01 2.60.40.2680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 36.0 3.78e-01 95.2% 72.3%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.55 33.0 3.40e-01 92.0% 61.5%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 39.0 3.84e-01 96.8% 68.1%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 49.0 4.25e-01 100.0% 84.3%
3p9xA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.54 31.0 2.73e-01 95.2% 35.4%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.53 41.0 4.01e-01 84.0% 74.1%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.53 47.0 4.37e-01 98.4% 86.5%
1cttA02 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 34.0 3.55e-01 96.0% 70.4%
3ijfX00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 37.0 3.82e-01 100.0% 74.8%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 34.0 3.51e-01 84.8% 70.6%
4w6yA00 2.60.120.1210 Mainly Beta › Sandwich › Jelly Rolls › 0.51 32.0 3.08e-01 93.6% 52.7%
3q34A00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.50 35.0 3.15e-01 70.4% 93.1%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.50 37.0 3.76e-01 100.0% 76.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964308 1.1.13.37 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 0.87 79.0 7.70e-01 96.0% 94.1%
4602833 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 76.0 7.46e-01 96.8% 94.1%
3949305 1.1.13.54 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L 0.83 77.0 7.31e-01 98.4% 97.9%
3504737 1.1.13.54 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L 0.83 77.0 7.39e-01 98.4% 99.3%
3861730 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.77 38.0 4.46e-01 85.6% 66.7%
3888326 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 39.0 4.31e-01 92.8% 65.0%
3720023 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 45.0 4.96e-01 92.0% 79.0%
4810019 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.70 55.0 5.82e-01 95.2% 92.7%
3982237 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 46.0 5.44e-01 71.2% 100.0%
3567698 11.1.1.127 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind 0.69 40.0 4.36e-01 87.2% 68.6%
5002750 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 53.0 5.74e-01 94.4% 100.0%
3059162 1.1.13.30 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 0.67 61.0 6.21e-01 98.4% 99.2%
3873251 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 38.0 4.18e-01 84.8% 69.0%
3750219 11.1.1.794 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 0.67 40.0 4.32e-01 87.2% 70.5%
3970015 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 42.0 4.72e-01 95.2% 84.0%
3965594 1.1.13.53 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 0.65 42.0 4.77e-01 90.4% 86.3%
4031101 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 43.0 4.26e-01 89.6% 65.4%
4888726 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.62 55.0 5.06e-01 97.6% 83.5%
3972102 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 42.0 4.58e-01 94.4% 87.0%
1941 11.11.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Fungal immunomodulatory protein, FIP › Fungal immunomodulatory protein, FIP › Fve 0.61 35.0 3.67e-01 83.2% 61.4%
4092486 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 35.0 3.14e-01 96.8% 39.4%
4878542 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.58 43.0 4.07e-01 100.0% 64.9%
4028718 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 42.0 3.94e-01 96.8% 61.3%
3592053 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 40.0 3.41e-01 72.8% 94.8%
3410523 11.2.1.7 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin 0.55 37.0 3.15e-01 96.8% 41.5%
5075917 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 47.0 4.49e-01 95.2% 78.0%
3980899 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 42.0 4.49e-01 91.2% 92.7%
3669363 11.1.1.389 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.54 42.0 4.23e-01 83.2% 90.8%
5031837 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.54 49.0 3.78e-01 99.2% 46.9%
3501447 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 41.0 3.99e-01 95.2% 72.6%
184718 1.1.13.16 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 0.53 47.0 4.37e-01 98.4% 86.5%
3679597 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 39.0 3.76e-01 100.0% 68.3%
3618967 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 40.0 3.80e-01 95.2% 69.7%
3760998 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 29.0 3.24e-01 75.2% 69.5%
3504105 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 40.0 3.86e-01 100.0% 73.6%
3368065 11.1.1.813 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS4_C 0.51 36.0 3.68e-01 86.4% 72.8%
3653954 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 43.0 3.47e-01 92.0% 47.1%
3466392 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 40.0 4.07e-01 97.6% 86.7%
3650734 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.50 42.0 4.01e-01 92.0% 78.6%
D2 high residues 195-375
PDB
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.86 67.0 7.47e-01 100.0% 99.3%
1umhA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.84 77.0 7.68e-01 100.0% 93.5%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.83 64.0 7.17e-01 97.8% 100.0%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.83 64.0 7.08e-01 100.0% 97.3%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.78 56.0 6.30e-01 100.0% 93.6%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.78 65.0 6.87e-01 100.0% 97.0%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 49.0 5.84e-01 100.0% 92.7%
1w0nA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.77 51.0 6.12e-01 100.0% 100.0%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.76 64.0 6.79e-01 99.4% 98.1%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.76 67.0 6.94e-01 100.0% 98.8%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.76 57.0 6.35e-01 100.0% 97.9%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 58.0 6.43e-01 98.9% 100.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 64.0 6.59e-01 100.0% 94.3%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.74 58.0 6.22e-01 100.0% 94.9%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 59.0 6.31e-01 100.0% 97.4%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 59.0 6.35e-01 98.3% 98.7%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.72 49.0 5.71e-01 100.0% 96.1%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.71 58.0 6.00e-01 100.0% 91.0%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.71 48.0 5.38e-01 100.0% 87.9%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.70 41.0 4.94e-01 98.3% 88.0%
3seeA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 66.0 6.18e-01 100.0% 100.0%
7t7zA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.69 55.0 5.99e-01 98.9% 100.0%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 55.0 5.90e-01 100.0% 96.7%
1sfpA00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.67 41.0 5.09e-01 94.5% 98.2%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.67 48.0 5.20e-01 100.0% 88.2%
1hn0A01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.66 55.0 5.48e-01 100.0% 84.8%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 44.0 5.15e-01 100.0% 93.2%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 47.0 5.41e-01 100.0% 97.1%
2vy0B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 61.0 5.34e-01 100.0% 93.9%
2jdaB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 46.0 5.12e-01 100.0% 91.5%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.65 37.0 4.45e-01 80.1% 84.5%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.65 55.0 5.77e-01 100.0% 97.0%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 48.0 5.28e-01 100.0% 93.2%
1upsB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 60.0 5.25e-01 100.0% 93.6%
1wmxA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.64 57.0 5.88e-01 100.0% 99.4%
2e26A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 59.0 5.62e-01 99.4% 84.7%
2jemA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.64 56.0 5.18e-01 93.9% 100.0%
4lplA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 47.0 5.27e-01 99.4% 97.2%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 34.0 4.27e-01 90.1% 88.2%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 59.0 5.75e-01 100.0% 91.4%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 50.0 5.30e-01 100.0% 93.1%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 58.0 5.36e-01 100.0% 98.3%
3eb7A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 51.0 5.40e-01 100.0% 95.7%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 45.0 4.60e-01 90.6% 75.6%
1o59A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 50.0 5.10e-01 100.0% 86.4%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 46.0 5.15e-01 100.0% 97.2%
2c9kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 51.0 5.36e-01 100.0% 95.7%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.61 40.0 4.46e-01 100.0% 82.6%
4ccdA03 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 57.0 5.54e-01 100.0% 98.5%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 33.0 4.35e-01 77.3% 100.0%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 47.0 5.10e-01 100.0% 99.3%
1nkgA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 52.0 5.34e-01 99.4% 97.7%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 5.18e-01 100.0% 96.5%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 40.0 4.01e-01 85.1% 66.8%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.81e-01 100.0% 88.6%
1ms5B02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 54.0 4.79e-01 100.0% 76.2%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.86e-01 100.0% 88.2%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.58e-01 100.0% 82.6%
8gsxA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 42.0 4.55e-01 98.3% 92.1%
3kmhA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 42.0 4.01e-01 93.4% 65.1%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.30e-01 100.0% 68.8%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.67e-01 100.0% 45.0%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 4.16e-01 100.0% 64.0%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 4.50e-01 74.6% 100.0%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 4.31e-01 100.0% 74.1%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 4.35e-01 100.0% 72.8%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.30e-01 100.0% 73.5%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 4.42e-01 100.0% 87.6%
1j1tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.49e-01 100.0% 97.8%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 4.48e-01 100.0% 93.9%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 4.18e-01 100.0% 77.2%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.65e-01 100.0% 93.4%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 4.36e-01 100.0% 91.7%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.52 42.0 4.49e-01 100.0% 98.7%
2xjpA01 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 4.04e-01 88.4% 75.4%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.25e-01 100.0% 74.8%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 4.22e-01 100.0% 73.6%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 4.15e-01 100.0% 75.7%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3892291 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.84 76.0 7.62e-01 100.0% 93.9%
3582968 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.84 77.0 7.72e-01 100.0% 95.6%
3597620 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.83 46.0 5.01e-01 98.9% 65.3%
337395 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.83 64.0 7.08e-01 100.0% 97.3%
3540406 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.82 77.0 7.46e-01 100.0% 89.7%
3486965 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.82 44.0 4.89e-01 98.9% 64.0%
5064594 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 60.0 6.43e-01 97.8% 89.7%
5041016 10.1.2.181 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.79 69.0 7.20e-01 100.0% 98.8%
5025469 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 55.0 6.48e-01 98.3% 100.0%
5083095 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 68.0 7.12e-01 100.0% 99.4%
3933402 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.78 43.0 5.33e-01 100.0% 84.3%
3180910 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.78 59.0 6.67e-01 98.9% 100.0%
3505636 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.78 48.0 5.91e-01 71.8% 93.3%
4509186 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.78 67.0 6.94e-01 100.0% 94.7%
5033393 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 62.0 6.79e-01 100.0% 99.3%
5061835 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 63.0 6.84e-01 100.0% 98.1%
2700769 10.32.1.12 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.78 52.0 6.19e-01 100.0% 98.4%
5054085 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 48.0 5.83e-01 100.0% 93.3%
5036514 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 48.0 5.86e-01 100.0% 94.2%
3796384 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.76 43.0 5.13e-01 100.0% 80.0%
5014960 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.76 64.0 6.51e-01 100.0% 90.3%
3571546 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.76 64.0 6.79e-01 98.9% 100.0%
3581843 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.76 63.0 6.62e-01 100.0% 95.2%
1174 10.32.1.70 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mann_GBD_bact 0.75 58.0 6.43e-01 98.9% 100.0%
3968310 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.75 58.0 6.43e-01 98.9% 100.0%
5059291 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.75 65.0 6.76e-01 97.8% 100.0%
5064648 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 41.0 5.40e-01 100.0% 98.0%
3767529 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.74 66.0 6.27e-01 100.0% 81.0%
5031167 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 59.0 6.38e-01 100.0% 97.4%
3941822 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 58.0 6.37e-01 100.0% 100.0%
1209559 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 59.0 6.34e-01 98.3% 98.1%
5003240 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 59.0 6.24e-01 100.0% 95.6%
3948941 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 56.0 6.02e-01 100.0% 93.5%
3932930 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.72 63.0 6.02e-01 100.0% 81.0%
3526370 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.72 47.0 5.62e-01 99.4% 98.3%
3891946 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.72 49.0 4.95e-01 100.0% 69.4%
4887934 10.3.1.8 beta sandwiches › jelly-roll › TNF-like › TNF-like › Bc2l-C_N 0.71 50.0 5.68e-01 100.0% 94.2%
4191287 10.1.1.46 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › InhA-like_MAM 0.71 50.0 5.30e-01 80.1% 80.6%
1137419 10.2.1.57 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Bbp16 0.71 48.0 5.38e-01 100.0% 87.9%
3624575 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 45.0 5.47e-01 99.4% 96.7%
4981915 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 61.0 6.39e-01 100.0% 100.0%
3998968 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.70 50.0 5.50e-01 100.0% 90.3%
3912164 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.70 67.0 6.09e-01 100.0% 83.5%
4934819 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 48.0 5.61e-01 99.4% 100.0%
3949369 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 60.0 5.97e-01 100.0% 88.1%
3231212 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.70 42.0 4.63e-01 100.0% 72.0%
1121 10.32.1.35 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YpM 0.70 41.0 4.94e-01 98.3% 88.0%
3795887 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.69 64.0 5.65e-01 100.0% 80.4%
3251299 10.32.1.18 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.69 51.0 5.68e-01 100.0% 96.5%
3876166 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.69 50.0 5.65e-01 100.0% 97.1%
5046269 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 60.0 6.08e-01 100.0% 93.3%
4366709 10.32.1.23 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid 0.68 42.0 5.00e-01 100.0% 90.8%
3270665 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.68 44.0 5.25e-01 100.0% 94.4%
3586331 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.68 63.0 5.66e-01 100.0% 83.6%
3188436 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 54.0 5.76e-01 100.0% 95.6%
3596404 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.67 41.0 5.16e-01 96.1% 100.0%
3242086 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.67 60.0 6.09e-01 100.0% 97.1%
3398852 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 44.0 5.30e-01 100.0% 100.0%
3233837 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.67 44.0 5.05e-01 100.0% 91.5%
3996318 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.67 48.0 5.43e-01 100.0% 98.5%
3891423 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 44.0 5.16e-01 98.9% 93.8%
3251815 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 42.0 5.06e-01 98.9% 96.6%
3364460 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.66 48.0 5.34e-01 100.0% 94.5%
4012587 10.32.1.232 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.65 56.0 5.79e-01 100.0% 95.3%
3268650 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 48.0 5.33e-01 100.0% 98.6%
3915790 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.64 44.0 5.07e-01 98.9% 97.7%
3191862 10.32.1.252 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7371 0.63 58.0 5.90e-01 100.0% 100.0%
4064392 10.32.1.40 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD2 0.63 44.0 4.50e-01 90.6% 73.1%
3242711 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 57.0 5.52e-01 100.0% 97.1%
5039141 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.62 47.0 5.15e-01 100.0% 94.7%
3614575 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 43.0 4.79e-01 100.0% 88.3%
5030450 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 48.0 5.32e-01 89.5% 100.0%
5038595 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 45.0 4.98e-01 100.0% 95.7%
3741799 10.32.1.24 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PITH 0.61 48.0 5.17e-01 100.0% 96.1%
5005245 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 55.0 5.11e-01 100.0% 77.4%
3607773 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.61 57.0 5.17e-01 100.0% 84.7%
3248740 10.32.1.17 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase 0.60 49.0 5.11e-01 100.0% 91.8%
3276612 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 42.0 4.68e-01 100.0% 92.1%
3510514 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.59 51.0 5.29e-01 98.3% 100.0%
3608754 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.58 54.0 5.05e-01 100.0% 86.7%
3492760 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 4.59e-01 100.0% 85.3%
3990817 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 46.0 4.71e-01 90.6% 87.4%
5060903 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 43.0 4.71e-01 98.9% 96.7%
3886215 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.56 42.0 4.38e-01 100.0% 84.2%
2100469 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.56 42.0 3.76e-01 77.3% 85.5%
4995808 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 46.0 4.84e-01 100.0% 96.9%
5051002 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 46.0 4.87e-01 100.0% 98.1%
5021919 10.1.2.194 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.55 47.0 4.86e-01 100.0% 95.9%
5051011 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 44.0 4.71e-01 100.0% 96.2%
5050173 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 46.0 4.85e-01 100.0% 100.0%
4019571 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 50.0 4.84e-01 100.0% 100.0%
5029875 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 49.0 4.95e-01 100.0% 98.4%
5048322 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 42.0 4.24e-01 95.0% 84.3%
D3 high residues 430-520
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09356.16 best Phage_BR0599 70.4 1.90e-19 74.7% 86.2%
D4 medium residues 160-194_380-426
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1goiB03 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.79 46.0 5.68e-01 93.9% 92.2%
1fbnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 35.0 4.24e-01 86.6% 94.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5026481 64.3.1.3 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 0.83 45.0 5.77e-01 92.7% 90.0%
3611022 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 37.0 3.75e-01 96.3% 76.5%