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NC_019408.1__YP_006989039.1__D869_gp010__00010
Bact-VirNC_019408.1__YP_006989039.1__D869_gp010__00010
Identity
- Accession:
- NC_019408 ↗
- Kingdom:
- phage
Quality
68.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Poindextervirus›
Caulobacter_phage_CcrRogue
TaxID: 2927986
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-246
D2
medium
residues 16-139
Domain cluster:
rep: KR063279.1__AKL88269.1__GMA3_92__00092__D11-122
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1whzA00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.56 | 25.0 | 3.30e-01 | 90.3% | 75.4% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.56 | 41.0 | 3.18e-01 | 77.4% | 88.9% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.54 | 42.0 | 2.98e-01 | 85.5% | 49.8% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.51 | 44.0 | 4.45e-01 | 100.0% | 91.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.81 | 43.0 | 4.00e-01 | 94.4% | 43.3% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.73 | 42.0 | 4.22e-01 | 100.0% | 56.0% |
| 3739946 | 5.1.4.265 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st | 0.54 | 41.0 | 2.96e-01 | 79.8% | 64.2% |
| 3559756 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 42.0 | 3.15e-01 | 83.1% | 56.7% |
| 3474473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.54 | 41.0 | 3.55e-01 | 100.0% | 52.4% |
| 4965319 | 241.11.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › Luciferase | 0.54 | 33.0 | 3.28e-01 | 83.1% | 56.3% |
| 3929900 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 42.0 | 2.83e-01 | 84.7% | 70.1% |
| 3721652 | 5.1.5.126 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_VPS8 | 0.52 | 42.0 | 2.90e-01 | 86.3% | 36.5% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 41.0 | 2.86e-01 | 86.3% | 41.2% |
| 3632998 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.50 | 40.0 | 2.86e-01 | 86.3% | 42.7% |