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NC_019408.1__YP_006989045.1__D869_gp016__00016

Bact-Vir

NC_019408.1__YP_006989045.1__D869_gp016__00016

Identity

Accession:
NC_019408 ↗
Kingdom:
phage

Quality

55.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-133
PDB
D2 high residues 157-236
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yd0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.60 40.0 3.90e-01 98.8% 61.8%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 36.0 3.66e-01 100.0% 79.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5037871 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.61 45.0 3.16e-01 82.5% 89.5%
3692353 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 31.0 3.43e-01 88.7% 66.2%