←Back to structures

NC_019408.1__YP_006989173.1__D869_gp288__00144

Bact-Vir

NC_019408.1__YP_006989173.1__D869_gp288__00144

Identity

Accession:
NC_019408 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Poindextervirus› Caulobacter_phage_CcrRogue

TaxID: 2927986

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-147
PDB
Domain cluster: rep: OQ414636.1__WDQ27620.1__EXVC031PHodr_039__00039__D9-186
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g71A01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.76 65.0 5.42e-01 90.3% 76.7%
2atzA00 3.90.920.20 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like 0.70 61.0 5.71e-01 93.1% 97.2%
1gmnA01 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.58 33.0 4.11e-01 93.1% 92.0%
2r7rA04 3.30.70.2480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 38.0 3.75e-01 71.7% 89.2%
2vvlA02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.50 38.0 3.33e-01 78.6% 85.6%
1i8nA00 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.50 30.0 3.76e-01 91.7% 97.8%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011497 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.82 75.0 6.67e-01 96.6% 93.0%
2721360 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.80 75.0 6.85e-01 100.0% 96.2%
185296 862.1.1.4 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › RepB_primase 0.79 75.0 6.63e-01 100.0% 87.4%
3602638 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 72.0 5.14e-01 100.0% 56.2%
5050906 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.76 70.0 5.39e-01 100.0% 92.1%
3945892 862.1.1.6 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Replicase 0.75 67.0 6.56e-01 95.9% 98.1%
3989046 862.1.1.8 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › AEP-TOTE 0.73 67.0 5.77e-01 99.3% 97.8%
5000831 862.1.1.5 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.72 66.0 5.28e-01 99.3% 97.1%
4419829 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.71 31.0 4.24e-01 95.9% 80.0%
3458273 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.65 32.0 4.31e-01 91.7% 90.7%
5010991 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.64 55.0 5.13e-01 91.7% 94.9%
3391873 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.62 31.0 4.32e-01 91.0% 94.7%
3211630 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.62 31.0 4.03e-01 88.3% 83.5%
3232561 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.61 31.0 4.10e-01 91.7% 88.7%
3391896 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.61 33.0 4.21e-01 91.7% 89.4%
3183387 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.61 31.0 3.93e-01 93.1% 82.4%
3990398 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 32.0 4.14e-01 93.1% 89.3%
3888455 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 34.0 4.27e-01 92.4% 90.0%
3217661 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 33.0 4.17e-01 91.7% 90.6%
3934305 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 34.0 4.13e-01 89.7% 83.0%
3505908 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 34.0 4.08e-01 91.0% 84.2%
3226096 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.60 33.0 4.16e-01 92.4% 90.6%
3930315 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 33.0 4.21e-01 93.1% 91.8%
3936711 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 32.0 4.26e-01 91.7% 100.0%
3620037 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 31.0 3.98e-01 91.7% 87.1%
3620988 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 33.0 4.19e-01 92.4% 92.9%
3214931 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 32.0 4.11e-01 92.4% 90.6%
3799084 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.59 31.0 3.89e-01 90.3% 84.7%
3214941 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.59 31.0 4.11e-01 92.4% 93.8%
3512609 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.58 32.0 4.12e-01 91.7% 91.8%
4524601 304.117.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Sec_GG 0.58 31.0 4.12e-01 74.5% 98.7%
3820637 390.1.1.6 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.58 30.0 3.94e-01 91.7% 91.3%
3624388 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.57 32.0 4.05e-01 92.4% 88.9%
3573710 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.57 32.0 4.03e-01 92.4% 89.8%
3620035 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.57 32.0 4.03e-01 92.4% 91.8%
3630326 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.57 32.0 3.68e-01 94.5% 74.3%
4540762 304.150.1.1 ↗ a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.56 37.0 4.20e-01 89.7% 91.3%
3241299 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.55 32.0 3.77e-01 93.1% 82.8%
3624385 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.55 31.0 3.72e-01 92.4% 81.0%
3502012 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.55 33.0 3.80e-01 93.1% 81.9%
3800169 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 31.0 3.78e-01 93.1% 86.3%
3791908 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 33.0 3.82e-01 99.3% 83.8%
3218868 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 31.0 3.73e-01 93.1% 86.3%
3502024 390.1.1.1 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 32.0 3.76e-01 90.3% 84.0%
3516643 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.54 34.0 4.10e-01 92.4% 97.9%
3625214 390.1.1.0 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.53 32.0 3.79e-01 92.4% 89.5%
5009315 11.1.1.1440 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29295 0.51 35.0 2.57e-01 70.3% 41.0%
D2 high residues 204-316_391-470
PDB
Domain cluster: rep: MK448641.1__QBX13135.1__JavanS753_0014__00014__D40-226
D3 high residues 323-385
PDB
Domain cluster: rep: NC_041927.1__YP_009600816.1__FDH44_gp191__00087__D230-288
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u6mA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.75 44.0 3.04e-01 100.0% 19.6%
2bueA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.74 43.0 3.06e-01 100.0% 20.7%
1nj8A03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.71 43.0 4.35e-01 100.0% 62.3%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 43.0 3.04e-01 74.6% 97.4%
4pioA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 37.0 2.75e-01 100.0% 22.1%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.58 40.0 3.99e-01 77.8% 68.1%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.58 42.0 3.77e-01 100.0% 53.8%
2mbfA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.82e-01 84.1% 64.9%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.57 37.0 3.54e-01 100.0% 54.4%
2ynaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 48.0 4.30e-01 100.0% 67.0%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 34.0 3.20e-01 100.0% 45.7%
2q7aA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 3.00e-01 100.0% 30.9%
4evuB00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.56 39.0 3.87e-01 100.0% 70.6%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 36.0 3.00e-01 100.0% 36.0%
1darA05 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 34.0 3.15e-01 100.0% 43.7%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.72e-01 90.5% 81.1%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.55 45.0 3.97e-01 100.0% 60.0%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.55 42.0 3.68e-01 100.0% 52.8%
3zduA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 37.0 3.50e-01 100.0% 57.9%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.54 39.0 3.58e-01 76.2% 86.7%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.54 34.0 3.20e-01 100.0% 50.0%
3nlcA01 3.30.70.2700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.90e-01 100.0% 71.1%
1yxsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.69e-01 100.0% 58.7%
1wg1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 32.0 3.19e-01 100.0% 52.1%
3ep6B01 3.30.360.50 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase 0.53 31.0 3.45e-01 92.1% 85.4%
2e7vA01 3.30.70.960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain 0.53 45.0 3.88e-01 100.0% 63.8%
4ne4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 42.0 3.17e-01 100.0% 34.7%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 36.0 2.70e-01 71.4% 52.1%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 45.0 3.73e-01 100.0% 61.3%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.51 44.0 3.45e-01 100.0% 69.4%
6j7cA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 45.0 3.35e-01 100.0% 98.2%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 36.0 3.30e-01 100.0% 55.3%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.50 43.0 3.69e-01 100.0% 62.4%
3iayA07 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.50 34.0 2.68e-01 76.2% 30.3%
5fqdC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 36.0 3.62e-01 100.0% 76.6%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3197481 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.75 44.0 3.07e-01 100.0% 20.0%
4159074 213.1.1.28 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 0.75 44.0 3.69e-01 100.0% 37.0%
3278966 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.74 43.0 3.05e-01 100.0% 20.6%
4364174 213.1.1.28 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 0.74 43.0 3.01e-01 100.0% 19.5%
3208006 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.72 42.0 3.33e-01 100.0% 30.1%
3953309 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.72 43.0 3.03e-01 100.0% 21.7%
3255495 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.70 41.0 3.04e-01 100.0% 23.9%
4025870 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.64 46.0 4.44e-01 100.0% 66.7%
3501950 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.61 53.0 3.52e-01 100.0% 96.3%
3426002 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.60 41.0 4.42e-01 100.0% 90.0%
4945580 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.60 38.0 3.59e-01 100.0% 51.9%
4773863 331.10.1.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.59 34.0 3.45e-01 90.5% 56.7%
3893 132.3.1.1 ↗ alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD 0.58 40.0 3.99e-01 77.8% 68.1%
3933184 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.58 48.0 4.52e-01 90.5% 88.0%
None — 0.56 42.0 3.03e-01 82.5% 95.4%
4872438 239.1.1.5 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.56 43.0 4.34e-01 100.0% 84.4%
5073129 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.55 35.0 3.39e-01 100.0% 54.7%
223480 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.55 42.0 3.72e-01 90.5% 81.1%
None — 0.54 40.0 2.91e-01 81.0% 96.0%
5047097 873.1.1.1 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.54 46.0 3.47e-01 98.4% 75.2%
1786500 304.9.1.75 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF8436 0.53 42.0 3.95e-01 100.0% 70.9%
3320985 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.51 38.0 3.12e-01 100.0% 39.3%
4074459 2003.1.5.55 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.51 39.0 2.79e-01 82.5% 93.5%
3992668 2003.1.5.42 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.51 35.0 2.52e-01 100.0% 22.4%
4319971 304.8.1.90 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF29741 0.50 35.0 3.36e-01 100.0% 62.7%
5016171 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 40.0 3.08e-01 92.1% 53.8%
D4 high residues 481-611
PDB
Domain cluster: rep: NC_013599.1__YP_003344913.1__Xfas53_gene23__00023__D245-340
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hxdA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 40.0 3.54e-01 84.0% 89.8%
D5 high residues 1115-1207
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 6.36e-01 98.9% 94.7%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 6.30e-01 100.0% 91.7%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 6.22e-01 95.7% 100.0%
4yiiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.94e-01 97.8% 100.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.41e-01 100.0% 74.8%
1lddA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.69e-01 94.6% 98.6%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 28.0 3.02e-01 75.3% 43.2%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.29e-01 97.8% 75.7%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.69 53.0 5.59e-01 92.5% 92.6%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.31e-01 95.7% 85.7%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.72e-01 97.8% 63.6%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.92e-01 97.8% 77.7%
1tqnA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.62 54.0 3.49e-01 100.0% 75.0%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 52.0 4.93e-01 100.0% 91.2%
2m7lA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 39.0 4.08e-01 82.8% 74.4%
2vqgA00 1.10.10.1280 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C 0.56 38.0 4.17e-01 84.9% 86.8%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.54 44.0 4.43e-01 95.7% 87.5%
2mj6A00 3.30.450.250 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 41.0 4.20e-01 83.9% 83.3%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 45.0 3.02e-01 92.5% 56.7%
6g0nA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 3.02e-01 95.7% 26.2%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.40e-01 77.4% 57.9%
4jbcA01 3.30.70.1690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 4.11e-01 93.5% 83.5%
1ni7A00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.51 42.0 3.61e-01 91.4% 75.2%
2dmcA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 27.0 3.03e-01 76.3% 63.5%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3368421 101.1.2.497 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25874 0.85 71.0 6.31e-01 98.9% 64.8%
3319006 101.1.2.497 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25874 0.84 70.0 6.55e-01 98.9% 73.6%
3466475 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.80 64.0 5.66e-01 96.8% 60.8%
3443787 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 6.51e-01 98.9% 90.6%
4024318 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 64.0 6.69e-01 98.9% 94.1%
5050876 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 6.34e-01 98.9% 91.8%
3680635 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.75 60.0 5.81e-01 100.0% 76.2%
3598642 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 61.0 5.40e-01 100.0% 60.9%
5048462 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.43e-01 100.0% 64.8%
3402809 101.1.2.160 ↗ alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.74 58.0 6.02e-01 100.0% 91.8%
3810002 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.74 60.0 5.68e-01 98.9% 73.6%
3392763 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.87e-01 97.8% 88.2%
3264333 101.1.2.124 ↗ alpha arrays › HTH › HTH › winged helix domain › Kin17_mid 0.73 59.0 5.35e-01 100.0% 64.8%
4942972 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.98e-01 97.8% 95.0%
3242475 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.72 56.0 5.69e-01 97.8% 84.4%
3176995 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 54.0 5.68e-01 100.0% 89.3%
3905735 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.71 56.0 5.88e-01 100.0% 92.9%
3579831 101.1.2.188 ↗ alpha arrays › HTH › HTH › winged helix domain › Roquin_1_2-like_ROQ 0.70 54.0 4.97e-01 97.8% 64.2%
3236724 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.45e-01 100.0% 77.1%
4933807 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.72e-01 95.7% 92.9%
3168448 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.69 56.0 5.06e-01 98.9% 63.6%
3169050 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.68 54.0 5.48e-01 100.0% 86.0%
3246949 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 5.70e-01 97.8% 100.0%
3784677 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.67 57.0 4.32e-01 98.9% 39.1%
3258350 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 61.0 5.62e-01 100.0% 79.2%
3169408 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.66 46.0 5.11e-01 100.0% 94.3%
4609204 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 5.23e-01 98.9% 100.0%
3413597 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.64 57.0 3.86e-01 98.9% 35.4%
3685767 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.78e-01 98.9% 76.0%
3731202 101.1.2.455 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_CDT1 0.63 57.0 4.74e-01 100.0% 62.5%
3925904 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.63 53.0 4.36e-01 100.0% 49.7%
5051570 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 5.16e-01 96.8% 80.0%
5061722 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 52.0 4.96e-01 100.0% 76.1%
3724312 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 46.0 4.79e-01 97.8% 85.9%
5044477 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 5.19e-01 97.8% 88.0%
4008765 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 5.03e-01 95.7% 85.3%
4487146 244.1.1.33 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › PF30157 0.59 37.0 3.40e-01 93.5% 47.2%
3277661 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 40.0 3.91e-01 73.1% 87.6%
4047545 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 44.0 3.75e-01 83.9% 72.9%
5052072 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.56 33.0 3.31e-01 80.6% 54.0%
3255051 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.55 37.0 3.62e-01 71.0% 73.3%
3069404 223.1.1.35 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.54 42.0 3.83e-01 84.9% 85.7%
3171919 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 37.0 3.86e-01 76.3% 96.5%
3229102 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 38.0 2.80e-01 88.2% 29.2%
3658452 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 45.0 3.02e-01 100.0% 26.0%
3322500 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.51 39.0 2.74e-01 84.9% 54.3%
5018825 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 37.0 3.54e-01 77.4% 73.6%
3744790 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.51 40.0 3.77e-01 86.0% 86.1%
3714622 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 35.0 3.23e-01 77.4% 55.0%
3378485 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 41.0 3.09e-01 94.6% 46.0%
3242147 5067.1.1.5 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing 0.50 42.0 2.52e-01 95.7% 59.8%
D6 medium residues 612-715
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fd5A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 58.0 5.32e-01 85.6% 87.9%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 57.0 5.07e-01 85.6% 83.4%
3tu3B03 1.20.1050.100 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 50.0 4.26e-01 75.0% 53.5%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 54.0 4.98e-01 82.7% 81.8%
2or0B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.68 49.0 4.59e-01 73.1% 83.9%
5k7fA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 54.0 4.92e-01 84.6% 84.8%
4mo7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 54.0 4.86e-01 83.7% 84.5%
3c1yA02 1.20.1260.110 Mainly Alpha › Up-down Bundle › Ferritin › DNA integrity scanning linker region 0.68 52.0 4.65e-01 81.7% 77.7%
3dcfA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 53.0 4.84e-01 85.6% 81.0%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 47.0 3.46e-01 76.0% 67.7%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 51.0 4.57e-01 83.7% 83.4%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 49.0 4.14e-01 80.8% 75.7%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 49.0 4.12e-01 83.7% 78.6%
3qkyA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 44.0 3.37e-01 72.1% 35.9%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 44.0 3.56e-01 72.1% 70.8%
2jbrA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.63 46.0 4.47e-01 78.8% 89.1%
4hzuS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.61 48.0 4.14e-01 83.7% 57.9%
5af7B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 46.0 4.04e-01 77.9% 60.8%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 46.0 4.48e-01 86.5% 71.2%
3nivC02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 45.0 4.29e-01 79.8% 69.4%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.60 43.0 4.40e-01 76.9% 78.2%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 46.0 3.20e-01 84.6% 38.9%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 49.0 4.52e-01 89.4% 71.0%
3ihvA03 1.25.40.900 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 41.0 3.72e-01 71.2% 56.8%
3zn3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 44.0 3.33e-01 78.8% 45.5%
6humG01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.58 38.0 3.29e-01 74.0% 43.1%
1hzfA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 47.0 3.43e-01 91.3% 84.4%
3pasA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 40.0 3.28e-01 72.1% 67.9%
2pbxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 45.0 3.70e-01 86.5% 70.6%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.56 38.0 3.40e-01 94.2% 49.7%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 34.0 3.86e-01 76.9% 80.8%
8e9gJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.56 35.0 2.96e-01 74.0% 38.9%
7ep1B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 46.0 3.59e-01 94.2% 79.8%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 46.0 3.85e-01 96.2% 81.6%
5tgzA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 45.0 3.35e-01 94.2% 81.2%
4wz9A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.54 44.0 3.10e-01 88.5% 44.2%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 39.0 3.42e-01 80.8% 62.4%
2e9xD01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 3.48e-01 77.9% 80.3%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.51 39.0 3.30e-01 81.7% 100.0%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4615627 4973.1.1.1 ↗ alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind 0.78 54.0 6.30e-01 71.2% 100.0%
4030233 603.1.1.6 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.73 51.0 4.14e-01 73.1% 84.6%
3396744 603.1.1.6 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.70 49.0 3.98e-01 72.1% 91.3%
4024126 1065.1.1.0 ↗ alpha bundles › SPX domain › SPX domain › SPX domain 0.70 53.0 4.06e-01 79.8% 58.7%
3592136 603.1.1.17 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.69 50.0 3.96e-01 76.0% 80.9%
3638575 109.3.1.170 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_4 0.68 52.0 3.86e-01 80.8% 57.5%
3565045 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 48.0 4.23e-01 75.0% 100.0%
4177628 6075.1.1.1 ↗ alpha bundles › DisA helical linker domain › DisA helical linker domain › DisA helical linker domain › DisA-linker 0.66 52.0 4.63e-01 84.6% 80.7%
3742057 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 53.0 3.39e-01 87.5% 30.9%
3441767 4133.1.1.2 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 0.65 55.0 4.10e-01 92.3% 46.7%
4329880 6075.1.1.1 ↗ alpha bundles › DisA helical linker domain › DisA helical linker domain › DisA helical linker domain › DisA-linker 0.64 49.0 4.34e-01 81.7% 76.8%
3915562 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 44.0 4.29e-01 70.2% 92.2%
3782276 604.6.1.2 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.63 45.0 4.21e-01 74.0% 78.5%
3962485 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.63 50.0 4.60e-01 86.5% 84.3%
3743709 1065.1.1.1 ↗ alpha bundles › SPX domain › SPX domain › SPX domain › SPX 0.63 45.0 3.63e-01 76.0% 78.1%
3371169 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 48.0 3.81e-01 78.8% 72.3%
3711112 4198.1.1.0 ↗ alpha arrays › TerB-like › TerB-like › TerB-like 0.62 49.0 4.38e-01 84.6% 83.4%
3623082 4015.1.1.1 ↗ alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.61 51.0 3.84e-01 89.4% 44.9%
3927015 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.60 44.0 4.12e-01 76.0% 85.6%
3960314 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.60 43.0 4.23e-01 79.8% 69.6%
4945647 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 42.0 4.35e-01 76.0% 77.0%
3635187 109.62.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › Ebp1_C 0.59 52.0 4.00e-01 99.0% 86.8%
3217304 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.58 42.0 4.25e-01 76.0% 76.2%
5056502 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.58 50.0 3.31e-01 97.1% 46.4%
5013708 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.57 40.0 3.95e-01 75.0% 68.2%
4978717 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.57 39.0 3.90e-01 71.2% 69.5%
3309955 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 43.0 4.45e-01 81.7% 88.0%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 41.0 3.43e-01 76.0% 47.2%
5038800 3579.1.1.1 ↗ extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 0.56 36.0 3.34e-01 71.2% 50.8%
3756899 603.1.1.17 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.55 44.0 3.51e-01 85.6% 83.4%
3513473 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.55 41.0 3.62e-01 77.9% 54.0%
4187493 603.1.1.103 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.54 47.0 4.24e-01 96.2% 71.0%
3284946 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.54 46.0 3.78e-01 95.2% 62.0%
4436111 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.52 43.0 3.36e-01 90.4% 98.7%
3258339 101.1.10.12 ↗ alpha arrays › HTH › HTH › Cyclin-like › Spy1 0.52 30.0 2.76e-01 92.3% 40.0%
3493552 109.4.1.1154 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS7_N 0.51 43.0 2.71e-01 95.2% 51.8%
D7 medium residues 716-829
PDB
Domain cluster: rep: IMGVR_UViG_3300033990_000324-3300033990-Ga0373184_0002060_21170_24340__D289-396
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b69A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 26.0 3.25e-01 72.8% 62.3%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 26.0 2.61e-01 71.9% 38.8%
1nbwA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 35.0 3.33e-01 86.8% 54.5%
3p9dE01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.55 44.0 3.41e-01 87.7% 82.6%
6ks6G01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.52 42.0 3.25e-01 87.7% 83.1%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 26.0 2.82e-01 82.5% 52.6%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 25.0 2.72e-01 80.7% 50.5%
5zg8A02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 38.0 2.80e-01 78.9% 90.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3805154 210.1.1.2 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N 0.58 33.0 2.72e-01 78.1% 29.3%
5073881 593.1.1.1 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.57 48.0 3.19e-01 93.9% 82.2%
3800362 101.1.2.267 ↗ alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.55 35.0 3.49e-01 85.1% 60.8%
4615793 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.53 32.0 3.52e-01 84.2% 74.4%
4020975 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 35.0 3.64e-01 86.8% 72.4%
3590781 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.52 31.0 3.47e-01 82.5% 74.4%
3990034 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.51 30.0 3.31e-01 82.5% 73.3%
3853273 327.11.2.27 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.51 23.0 3.17e-01 79.8% 90.0%
2323851 1196.1.1.0 ↗ 0.50 35.0 2.60e-01 71.1% 56.0%
3217417 5001.1.1.121 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › TRAM_LAG1_CLN8 0.50 38.0 2.76e-01 81.6% 32.6%
D8 medium residues 830-894_1050-1111
PDB
Domain cluster: rep: IMGVR_UViG_3300023203_000752-3300023203-Ga0255812_1039812049__D640-668_680-695_829-895
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 33.0 3.57e-01 71.7% 54.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.50 27.0 2.82e-01 82.7% 54.8%
D9 medium residues 895-1049
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 71.0 6.31e-01 91.6% 89.2%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 62.0 6.34e-01 90.3% 87.3%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 67.0 6.75e-01 91.6% 98.0%
1g8pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 61.0 5.63e-01 91.0% 93.5%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 60.0 5.79e-01 91.6% 97.1%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 57.0 5.63e-01 91.6% 84.0%
2qbyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 57.0 5.50e-01 91.6% 97.1%
1g19A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 60.0 5.26e-01 100.0% 90.2%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 59.0 5.12e-01 98.7% 95.2%
2dr3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 59.0 5.15e-01 100.0% 90.9%
6qelJ01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 57.0 5.43e-01 96.8% 83.1%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 58.0 5.27e-01 98.1% 97.0%
2fepA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 41.0 4.45e-01 85.8% 77.4%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 5.17e-01 98.7% 86.1%
8dtpC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 4.84e-01 100.0% 98.0%
4wiaC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 58.0 5.05e-01 100.0% 91.2%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 4.93e-01 91.6% 90.8%
2ozeA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.39e-01 96.1% 83.5%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 40.0 4.31e-01 85.8% 77.6%
1gg1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 49.0 3.81e-01 87.1% 90.0%
1gz0B02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.60 36.0 3.54e-01 86.5% 53.9%
6j19A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 55.0 4.56e-01 99.4% 87.4%
4rk0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 41.0 4.43e-01 72.3% 92.5%
2hqbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 38.0 4.15e-01 85.2% 77.9%
3q41B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 44.0 4.29e-01 80.6% 89.2%
2pl3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 4.31e-01 92.3% 91.4%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 4.39e-01 81.3% 98.2%
4q6bA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 42.0 4.51e-01 90.3% 88.8%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 38.0 3.88e-01 85.8% 70.3%
1usgA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 4.43e-01 90.3% 86.1%
3n0wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 4.59e-01 90.3% 94.7%
1rz3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 4.41e-01 89.7% 98.4%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 38.0 4.01e-01 85.8% 78.3%
7x0hC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 42.0 4.44e-01 90.3% 90.5%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 4.27e-01 93.5% 87.3%
1amuA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 35.0 3.46e-01 89.7% 58.8%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 4.27e-01 81.9% 99.4%
4yv7A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 43.0 4.34e-01 91.6% 82.8%
3hs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 42.0 4.39e-01 90.3% 90.6%
3kjxA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 42.0 4.37e-01 89.7% 90.1%
2gk6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 47.0 3.93e-01 94.8% 64.5%
2h3hB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 43.0 4.28e-01 89.7% 82.8%
4pyrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 38.0 4.18e-01 89.7% 95.0%
1ba2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 36.0 3.89e-01 84.5% 83.2%
3h16B00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.53 38.0 4.07e-01 85.2% 85.4%
3gybA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 41.0 4.30e-01 89.7% 92.0%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 4.03e-01 91.0% 71.2%
3o8lA04 3.40.50.460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain 0.52 41.0 4.26e-01 96.1% 89.1%
5wq5A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 4.56e-01 94.8% 94.3%
2x7xA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 42.0 4.40e-01 89.0% 96.4%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 39.0 3.98e-01 98.1% 79.5%
6xm1C01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.52 37.0 3.96e-01 72.9% 94.6%
1z6aA01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.52 43.0 3.95e-01 90.3% 97.6%
1gg4A01 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.51 35.0 3.74e-01 86.5% 78.7%
3sg0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 4.19e-01 91.6% 88.2%
4evsA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 46.0 4.50e-01 99.4% 95.9%
3berA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.96e-01 94.8% 100.0%
7jt8I01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 42.0 3.70e-01 89.0% 78.8%
6gt9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 44.0 4.26e-01 94.2% 88.5%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 46.0 4.15e-01 100.0% 90.5%
4qdiA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.50 36.0 3.74e-01 87.1% 79.7%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931926 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 76.0 5.90e-01 100.0% 50.2%
3352161 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.79 68.0 5.90e-01 91.6% 75.7%
3883422 2004.1.1.153 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.78 74.0 5.79e-01 100.0% 77.0%
5029777 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.78 72.0 6.00e-01 100.0% 60.0%
5011495 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 68.0 6.16e-01 97.4% 71.5%
5003620 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.77 71.0 5.44e-01 100.0% 45.7%
5081314 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 70.0 5.84e-01 100.0% 58.5%
5035042 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.77 72.0 5.83e-01 100.0% 60.0%
3256248 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.76 51.0 5.38e-01 80.6% 74.3%
3598741 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 69.0 5.94e-01 98.1% 89.4%
4443044 2004.1.1.1014 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 0.74 69.0 5.43e-01 100.0% 52.3%
3435798 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 63.0 5.92e-01 90.3% 82.2%
3602833 2004.1.1.46 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.74 68.0 5.50e-01 100.0% 66.9%
5064031 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 66.0 5.13e-01 100.0% 46.2%
3701562 148.1.3.178 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA 0.73 68.0 4.79e-01 100.0% 40.7%
3071116 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 63.0 5.77e-01 91.0% 84.6%
3377628 2004.1.1.46 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.72 61.0 5.73e-01 90.3% 95.8%
3784919 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.72 65.0 5.71e-01 96.8% 87.1%
3506784 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 60.0 5.36e-01 91.0% 67.4%
3605779 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 59.0 5.51e-01 89.7% 84.7%
4998715 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 60.0 6.10e-01 96.8% 92.9%
5000049 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.69 59.0 5.39e-01 91.6% 82.0%
4943362 2004.1.1.1215 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cdc6_lid 0.68 59.0 5.46e-01 91.0% 88.9%
1112963 2004.1.1.35 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.68 57.0 5.94e-01 91.6% 95.1%
3958095 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 4.86e-01 100.0% 67.3%
4955369 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.67 57.0 5.24e-01 91.0% 75.0%
5042410 2004.1.1.152 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KAP_NTPase 0.67 57.0 4.93e-01 91.0% 93.6%
3960482 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 5.44e-01 96.8% 98.0%
3782509 2004.1.1.189 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.66 57.0 4.81e-01 91.0% 98.0%
3575142 2004.1.1.21 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecA 0.65 57.0 4.88e-01 92.3% 90.6%
4989660 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.65 61.0 5.17e-01 100.0% 89.4%
4002451 2004.1.1.93 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.65 59.0 5.57e-01 100.0% 82.2%
4197849 148.1.3.198 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Bac_DnaA 0.65 59.0 5.00e-01 96.8% 77.1%
4520031 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 59.0 5.03e-01 97.4% 79.6%
3836355 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.65 58.0 5.01e-01 97.4% 83.7%
4255084 2004.1.1.35 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.65 56.0 5.48e-01 92.3% 91.5%
5078443 2004.1.1.790 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.64 60.0 5.22e-01 99.4% 90.2%
5031865 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.64 59.0 5.16e-01 98.1% 92.9%
3622561 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 54.0 5.31e-01 90.3% 84.2%
4279180 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 58.0 5.74e-01 98.1% 98.1%
3465680 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.63 53.0 5.04e-01 90.3% 91.4%
4606234 2004.1.1.35 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.63 54.0 5.17e-01 92.3% 83.3%
3675939 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 56.0 3.72e-01 96.8% 87.3%
3348426 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.62 52.0 5.00e-01 89.0% 97.7%
3804920 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.62 56.0 5.26e-01 96.8% 89.2%
2077696 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.61 48.0 3.98e-01 82.6% 96.0%
3726364 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.61 53.0 5.19e-01 98.1% 84.7%
3277906 2004.1.1.239 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase 0.61 55.0 5.04e-01 96.8% 90.5%
4944803 2004.1.1.220 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 0.61 54.0 4.70e-01 96.1% 91.9%
3716754 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.61 56.0 3.98e-01 100.0% 48.4%
3425610 2004.1.1.196 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.60 52.0 4.45e-01 92.3% 95.5%
3814237 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.60 54.0 4.83e-01 97.4% 86.4%
4179765 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.60 54.0 4.84e-01 96.8% 80.0%
4077893 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 53.0 3.65e-01 96.1% 56.8%
5069347 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 51.0 4.55e-01 92.3% 89.8%
3605416 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 50.0 4.85e-01 91.6% 93.1%
4162292 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.59 53.0 4.38e-01 96.8% 64.4%
4487386 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 53.0 3.47e-01 96.8% 27.8%
3202677 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.59 49.0 4.47e-01 90.3% 86.7%
1253166 2007.1.2.13 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.58 43.0 4.69e-01 90.3% 96.0%
3237175 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.57 51.0 4.45e-01 95.5% 99.1%
3636895 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 53.0 4.15e-01 100.0% 98.1%
3591425 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.57 49.0 3.93e-01 92.3% 71.5%
4093200 2007.1.2.7 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.57 40.0 4.32e-01 72.3% 99.2%
3586885 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.55 37.0 3.71e-01 85.8% 65.5%
9584 2004.1.1.44 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK 0.54 45.0 4.30e-01 89.7% 97.8%
3588299 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.54 42.0 4.55e-01 87.7% 97.7%
1758184 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.54 38.0 4.26e-01 89.0% 96.6%
4310968 2007.1.7.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH 0.54 45.0 4.32e-01 92.3% 92.4%
4942243 2007.1.7.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 0.53 46.0 4.61e-01 92.3% 92.3%
5073941 4002.1.1.3 ↗ alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 0.53 44.0 4.45e-01 91.0% 87.5%
5065467 4002.1.1.3 ↗ alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 0.53 45.0 4.51e-01 93.5% 91.9%
3787845 2004.1.1.176 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp 0.52 44.0 3.74e-01 91.6% 98.0%
3690745 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 44.0 3.62e-01 96.1% 75.3%
4549410 506.2.1.0 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.50 43.0 2.72e-01 94.2% 23.4%
3709778 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 44.0 3.72e-01 96.8% 75.5%
3595703 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.50 44.0 3.74e-01 96.8% 76.9%