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NC_019408.1__YP_006989249.1__D869_gp212__00220

Bact-Vir

NC_019408.1__YP_006989249.1__D869_gp212__00220

Identity

Accession:
NC_019408 ↗
Kingdom:
phage

Quality

79.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Poindextervirus› Caulobacter_phage_CcrRogue

TaxID: 2927986

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-65
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mlmA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.54 41.0 2.94e-01 88.9% 50.5%
D2 medium residues 66-126
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 58.0 5.48e-01 82.0% 86.1%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 3.91e-01 75.4% 44.4%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.10e-01 86.9% 89.4%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.62e-01 78.7% 100.0%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 49.0 4.47e-01 73.8% 70.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 4.97e-01 86.9% 94.2%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.10e-01 78.7% 81.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 52.0 5.27e-01 82.0% 87.1%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 4.96e-01 88.5% 88.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.85e-01 85.2% 86.8%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.28e-01 80.3% 81.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 4.90e-01 82.0% 98.4%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.01e-01 83.6% 82.5%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 4.91e-01 77.0% 100.0%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 4.90e-01 82.0% 84.4%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 4.93e-01 80.3% 95.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 4.84e-01 86.9% 84.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 46.0 4.78e-01 77.0% 100.0%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 4.29e-01 83.6% 65.6%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 4.69e-01 82.0% 86.8%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 4.90e-01 82.0% 100.0%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 46.0 3.91e-01 80.3% 73.1%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 4.71e-01 86.9% 89.2%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 45.0 3.82e-01 78.7% 84.3%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.85e-01 85.2% 89.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 46.0 4.53e-01 82.0% 85.1%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.71e-01 77.0% 88.7%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.52e-01 80.3% 96.7%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 47.0 4.79e-01 85.2% 98.3%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.40e-01 83.6% 86.1%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 3.85e-01 91.8% 69.7%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.65e-01 80.3% 87.8%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 3.35e-01 80.3% 88.0%
2iu4A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.56 39.0 3.08e-01 77.0% 82.1%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.54 37.0 3.86e-01 70.5% 83.3%
2wadA01 6.20.70.10 Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › 0.50 25.0 3.16e-01 90.2% 90.0%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4116754 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.81 54.0 6.20e-01 77.0% 93.3%
4627221 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.78 56.0 5.48e-01 82.0% 70.8%
3537417 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 52.0 5.93e-01 77.0% 95.6%
4009688 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.76 55.0 5.44e-01 83.6% 72.3%
3798312 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 56.0 5.41e-01 82.0% 85.7%
4665407 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 52.0 5.64e-01 82.0% 90.0%
3480597 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 5.04e-01 88.5% 80.0%
5009412 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.72 53.0 3.46e-01 85.2% 18.5%
4165723 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.72 58.0 5.73e-01 91.8% 83.1%
3486326 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 52.0 5.52e-01 77.0% 89.1%
3744277 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 53.0 5.77e-01 77.0% 96.0%
3821920 4.1.1.283 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.72 53.0 5.56e-01 78.7% 90.9%
4956443 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.46e-01 80.3% 88.3%
4516378 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.71 53.0 5.12e-01 82.0% 70.0%
4023868 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.71 57.0 4.18e-01 86.9% 49.0%
3326132 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.16e-01 85.2% 73.8%
2642957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.30e-01 90.2% 93.8%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.70 51.0 5.39e-01 77.0% 90.9%
4571610 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.70 50.0 5.11e-01 75.4% 84.7%
3401559 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 55.0 5.39e-01 83.6% 93.8%
3598271 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 4.08e-01 88.5% 46.5%
3611694 219.1.1.19 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C54 0.70 52.0 3.37e-01 82.0% 23.4%
3675511 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.70 58.0 5.34e-01 91.8% 76.2%
4945288 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 47.0 5.37e-01 77.0% 100.0%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.69 56.0 4.28e-01 88.5% 53.6%
3236896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 4.56e-01 72.1% 84.3%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.69 56.0 4.42e-01 88.5% 60.5%
3777241 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 4.60e-01 88.5% 75.5%
4261791 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.68 57.0 4.26e-01 90.2% 53.1%
3258767 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.68 57.0 4.20e-01 90.2% 51.3%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 52.0 4.70e-01 80.3% 70.0%
4269256 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.68 51.0 5.14e-01 78.7% 83.3%
2803945 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.68 56.0 4.25e-01 90.2% 55.3%
3933892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 5.12e-01 78.7% 95.0%
3707479 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.68 56.0 3.87e-01 90.2% 39.4%
5036498 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.68 53.0 4.92e-01 83.6% 72.0%
165657 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 49.0 4.79e-01 77.0% 83.6%
3491615 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.67 60.0 3.97e-01 100.0% 42.8%
1503651 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 51.0 4.61e-01 80.3% 70.0%
3927795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 4.99e-01 78.7% 93.3%
3955235 4.1.1.183 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4926 0.67 56.0 5.09e-01 90.2% 81.2%
3467678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 4.25e-01 83.6% 57.3%
3328489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 4.72e-01 78.7% 74.3%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 50.0 5.24e-01 78.7% 90.7%
3511007 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.67 59.0 4.73e-01 100.0% 81.7%
3937299 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 4.45e-01 82.0% 63.3%
4461457 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 49.0 4.85e-01 78.7% 78.1%
3935464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.36e-01 85.2% 95.0%
3526950 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 49.0 4.94e-01 78.7% 95.0%
3495447 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 58.0 4.68e-01 100.0% 74.2%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 48.0 4.81e-01 78.7% 96.8%
3245045 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.65 54.0 3.72e-01 90.2% 39.5%
3512419 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 52.0 4.64e-01 86.9% 77.6%
3259033 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 48.0 4.92e-01 80.3% 96.7%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 47.0 4.64e-01 78.7% 96.9%
3898370 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 47.0 4.81e-01 77.0% 100.0%
3931417 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 47.0 4.78e-01 78.7% 100.0%
3600929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.30e-01 80.3% 75.3%
3503981 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 47.0 4.80e-01 80.3% 88.3%
3539147 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 4.69e-01 85.2% 84.3%
4507316 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.62 46.0 3.80e-01 82.0% 72.2%
3495904 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.35e-01 77.0% 100.0%
3703934 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 5.01e-01 90.2% 90.0%
3483363 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.53e-01 82.0% 86.2%
3569639 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 48.0 4.41e-01 86.9% 78.8%
4270910 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 44.0 4.31e-01 83.6% 81.4%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.59 47.0 3.79e-01 88.5% 61.7%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.69e-01 96.7% 84.0%
3928050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 3.67e-01 90.2% 64.4%