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NC_019408.1__YP_006989331.1__D869_gp130__00302
Bact-VirNC_019408.1__YP_006989331.1__D869_gp130__00302
Identity
- Accession:
- NC_019408 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Poindextervirus›
Caulobacter_phage_CcrRogue
TaxID: 2927986
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-125
Domain cluster:
rep: MK967380.1__QDM56058.1__SEA_SLEEPYHEAD_43__00043__D12-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19698.6 best | DUF6197 | 57.7 | 1.80e-15 | 95.9% | 93.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.54 | 30.0 | 3.86e-01 | 90.2% | 100.0% |
| 2x49A03 | 1.10.8.540 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › FHIPEP family, domain 3 | 0.53 | 28.0 | 3.12e-01 | 82.1% | 64.4% |
| 3o3mB01 | 1.20.1270.370 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 30.0 | 3.20e-01 | 77.2% | 63.1% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 29.0 | 3.63e-01 | 100.0% | 100.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3405876 | 592.2.1.12 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › PF26051 | 0.61 | 31.0 | 3.78e-01 | 87.0% | 77.3% |
| 3844868 | 6088.1.1.2 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 | 0.60 | 31.0 | 3.80e-01 | 87.0% | 78.7% |
| 3531016 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.51 | 33.0 | 3.55e-01 | 98.4% | 75.7% |
| 3276285 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 42.0 | 4.19e-01 | 100.0% | 85.6% |