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NC_019408.1__YP_006989331.1__D869_gp130__00302

Bact-Vir

NC_019408.1__YP_006989331.1__D869_gp130__00302

Identity

Accession:
NC_019408 ↗
Kingdom:
phage

Quality

80.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-125
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19698.6 best DUF6197 57.7 1.80e-15 95.9% 93.7%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.54 30.0 3.86e-01 90.2% 100.0%
2x49A03 1.10.8.540 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › FHIPEP family, domain 3 0.53 28.0 3.12e-01 82.1% 64.4%
3o3mB01 1.20.1270.370 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 30.0 3.20e-01 77.2% 63.1%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 29.0 3.63e-01 100.0% 100.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405876 592.2.1.12 alpha arrays › PWI domain-like › YugE-like › YugE-like › PF26051 0.61 31.0 3.78e-01 87.0% 77.3%
3844868 6088.1.1.2 alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 0.60 31.0 3.80e-01 87.0% 78.7%
3531016 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.51 33.0 3.55e-01 98.4% 75.7%
3276285 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.51 42.0 4.19e-01 100.0% 85.6%