Back to structures

NC_019411.1__YP_006989887.1__D870_gp267__00154

Bact-Vir

NC_019411.1__YP_006989887.1__D870_gp267__00154

Identity

Accession:
NC_019411 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-82
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hx3A01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.67 45.0 4.88e-01 70.0% 100.0%
1re5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.52 39.0 3.70e-01 82.5% 88.2%
1d2nA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 34.0 3.65e-01 70.0% 80.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3783123 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.79 60.0 6.52e-01 83.7% 98.5%
3651272 3361.1.1.0 alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 0.79 58.0 5.85e-01 77.5% 100.0%
4995693 4230.1.1.0 alpha arrays › DnaD domain › DnaD domain › DnaD domain 0.77 53.0 5.54e-01 71.2% 86.7%
3309800 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.71 52.0 5.42e-01 77.5% 85.3%
3714404 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.68 52.0 5.35e-01 80.0% 86.7%