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NC_019411.1__YP_006989914.1__D870_gp240__00181

Bact-Vir

Identity

Accession:: NC_019411 ↗
Kingdom:: phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Shapirovirus› Caulobacter_phage_CcrSwift

TaxID: 2927984

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-78

PDB

Domain cluster: rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00065__D3-83_93-101

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3k2tA01	3.30.505.50	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain	0.57	34.0	3.87e-01	91.5%	89.1%
2i0rA01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.55	48.0	3.13e-01	100.0%	28.8%
3tfiA00	3.30.1360.120	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1	0.52	42.0	2.70e-01	90.1%	75.1%
2f2hA04	2.60.40.1180	Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II	0.52	41.0	3.54e-01	100.0%	55.0%
3zgzD04	2.20.28.290	Mainly Beta › Single Sheet › Rubrerythrin, domain 2 ›	0.50	29.0	3.02e-01	77.5%	59.7%
3i9v700	3.30.920.80	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15	0.50	40.0	3.39e-01	90.1%	65.4%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4000395	2007.1.1.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like	0.61	45.0	3.20e-01	100.0%	26.2%
4111045	243.1.1.64 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_2nd	0.59	39.0	3.41e-01	100.0%	45.7%
3932040	79.1.1.18 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1	0.59	37.0	3.59e-01	100.0%	56.2%
4465258	79.1.1.18 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1	0.58	36.0	3.20e-01	100.0%	44.0%
3411216	79.1.1.18 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1	0.58	37.0	3.29e-01	100.0%	45.0%
4499276	79.1.1.18 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1	0.56	35.0	3.42e-01	100.0%	56.2%
3230356	5.1.11.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed	0.55	47.0	2.84e-01	100.0%	28.2%
3713034	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.55	47.0	2.98e-01	100.0%	21.7%
5012768	5.1.10.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF6849	0.54	34.0	3.56e-01	84.5%	69.2%
4022213	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.54	38.0	2.30e-01	74.6%	22.0%
6646	241.2.1.2 ↗	a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › NADH_Oxid_Nqo15	0.51	41.0	3.43e-01	88.7%	65.4%