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NC_019411.1__YP_006990046.1__D870_gp108__00313

Bact-Vir

NC_019411.1__YP_006990046.1__D870_gp108__00313

Identity

Accession:
NC_019411 ↗
Kingdom:
phage

Quality

77.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Shapirovirus› Caulobacter_phage_CcrSwift

TaxID: 2927984

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 59-142
PDB
Domain cluster: rep: ON529853.1__UTC29322.1__BAMBUS_02400__00239__D33-108
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 4.40e-01 89.3% 87.5%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 39.0 3.37e-01 70.2% 90.4%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 36.0 4.19e-01 85.7% 100.0%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 34.0 2.64e-01 92.9% 25.5%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.82e-01 91.7% 79.2%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.05e-01 95.2% 79.8%
1t6sB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.95e-01 96.4% 84.4%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 32.0 3.38e-01 92.9% 72.0%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 4.08e-01 94.0% 92.3%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.51e-01 94.0% 61.6%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.63e-01 94.0% 68.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.67e-01 94.0% 70.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741097 101.1.2.164 ↗ alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 0.61 43.0 4.76e-01 94.0% 93.8%
3461579 101.1.2.148 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.59 43.0 3.55e-01 78.6% 98.2%
3661546 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.57 44.0 3.86e-01 94.0% 55.2%
4964911 101.1.2.920 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.56 39.0 3.46e-01 71.4% 76.0%
3297411 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.56 46.0 4.55e-01 95.2% 83.3%
3429589 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.55 44.0 3.70e-01 94.0% 50.3%
4108761 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.55 45.0 3.71e-01 95.2% 50.0%
3432076 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.54 44.0 4.05e-01 94.0% 67.3%
3670440 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.54 41.0 4.09e-01 95.2% 76.7%
3447799 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.54 45.0 3.85e-01 95.2% 57.7%
3930044 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 4.36e-01 92.9% 91.3%
3660086 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.54 44.0 3.57e-01 94.0% 86.9%
3450159 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.53 42.0 3.61e-01 90.5% 75.2%
3365155 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.53 46.0 4.09e-01 95.2% 75.8%
3313321 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.53 42.0 3.52e-01 91.7% 78.8%
3372061 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 45.0 3.81e-01 94.0% 78.6%
3446454 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 4.18e-01 94.0% 88.7%
3684542 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 45.0 3.86e-01 95.2% 60.0%
3682747 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 3.09e-01 94.0% 32.6%
3435809 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 45.0 4.12e-01 95.2% 74.5%
3323843 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 41.0 3.30e-01 95.2% 43.5%
3645078 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 42.0 3.84e-01 95.2% 69.1%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 39.0 3.70e-01 94.0% 67.6%
3378640 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 43.0 3.44e-01 94.0% 52.4%