←Back to structures
NC_019411.1__YP_006990051.1__D870_gp103__00318
Bact-VirNC_019411.1__YP_006990051.1__D870_gp103__00318
Identity
- Accession:
- NC_019411 ↗
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Shapirovirus›
Caulobacter_phage_CcrSwift
TaxID: 2927984
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-93
Domain cluster:
rep: OP620778.1__WGN97887.1__X__00473__D18-98
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 69.0 | 7.43e-01 | 96.4% | 93.0% |
| 1j75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 59.0 | 7.04e-01 | 83.3% | 100.0% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 63.0 | 6.17e-01 | 90.5% | 70.8% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 62.0 | 6.97e-01 | 85.7% | 94.0% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 64.0 | 6.83e-01 | 90.5% | 90.3% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 5.39e-01 | 100.0% | 48.6% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 65.0 | 6.89e-01 | 100.0% | 91.8% |
| 2zo4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 49.0 | 6.34e-01 | 72.6% | 100.0% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 59.0 | 5.70e-01 | 90.5% | 64.2% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 64.0 | 6.83e-01 | 91.7% | 91.8% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 60.0 | 6.78e-01 | 90.5% | 100.0% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 57.0 | 6.26e-01 | 86.9% | 88.4% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 65.0 | 6.40e-01 | 90.5% | 78.7% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 69.0 | 6.71e-01 | 90.5% | 92.2% |
| 7bqjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 58.0 | 5.94e-01 | 90.5% | 79.0% |
| 4d7kA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 57.0 | 5.46e-01 | 91.7% | 65.6% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 65.0 | 6.96e-01 | 86.9% | 100.0% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 68.0 | 5.82e-01 | 91.7% | 63.6% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 61.0 | 5.07e-01 | 92.9% | 50.0% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 6.23e-01 | 94.0% | 89.5% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 55.0 | 5.58e-01 | 91.7% | 75.0% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 60.0 | 4.92e-01 | 92.9% | 46.7% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 6.49e-01 | 91.7% | 94.0% |
| 3ljlA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 51.0 | 4.17e-01 | 92.9% | 39.6% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 57.0 | 5.62e-01 | 88.1% | 77.0% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 6.34e-01 | 100.0% | 91.7% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 48.0 | 5.68e-01 | 89.3% | 96.6% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 6.07e-01 | 90.5% | 87.4% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.73 | 58.0 | 4.19e-01 | 91.7% | 32.0% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.72e-01 | 88.1% | 80.0% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 5.25e-01 | 96.4% | 58.5% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 55.0 | 5.75e-01 | 90.5% | 90.7% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 5.95e-01 | 94.0% | 92.6% |
| 3qyfA03 | 1.10.10.1690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 | 0.71 | 46.0 | 5.20e-01 | 89.3% | 90.2% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.92e-01 | 92.9% | 96.8% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.47e-01 | 90.5% | 85.7% |
| 4q48A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 4.64e-01 | 91.7% | 50.0% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.69e-01 | 94.0% | 94.5% |
| 3htaC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 51.0 | 3.88e-01 | 94.0% | 33.9% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.69 | 54.0 | 5.77e-01 | 96.4% | 100.0% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 64.0 | 5.33e-01 | 100.0% | 62.6% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 5.46e-01 | 89.3% | 82.6% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 5.59e-01 | 92.9% | 88.7% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 62.0 | 4.98e-01 | 97.6% | 51.9% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 5.91e-01 | 89.3% | 94.9% |
| 1k78B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 5.08e-01 | 84.5% | 85.3% |
| 1z0xA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 48.0 | 5.29e-01 | 95.2% | 92.4% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.42e-01 | 85.7% | 58.7% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 5.26e-01 | 91.7% | 90.8% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.66 | 32.0 | 3.57e-01 | 85.7% | 59.1% |
| 3htuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 5.47e-01 | 86.9% | 100.0% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 44.0 | 4.98e-01 | 79.8% | 100.0% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 5.30e-01 | 89.3% | 98.6% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 5.38e-01 | 90.5% | 93.9% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 55.0 | 5.53e-01 | 98.8% | 93.0% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 5.33e-01 | 94.0% | 100.0% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 41.0 | 4.03e-01 | 79.8% | 60.6% |
| 1uzcA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.62 | 45.0 | 4.93e-01 | 97.6% | 94.2% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 50.0 | 4.55e-01 | 91.7% | 91.2% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.60 | 51.0 | 4.24e-01 | 91.7% | 88.0% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 38.0 | 4.30e-01 | 86.9% | 91.5% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.58 | 39.0 | 4.40e-01 | 81.0% | 95.2% |
| 2o5hA00 | 1.10.3510.10 | Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like | 0.57 | 46.0 | 4.12e-01 | 92.9% | 85.9% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 43.0 | 3.36e-01 | 84.5% | 52.2% |
| 4a15A03 | 1.10.275.40 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.55 | 46.0 | 4.00e-01 | 95.2% | 77.1% |
| 3vuqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 3.39e-01 | 84.5% | 60.8% |
| 3qkxB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 43.0 | 3.43e-01 | 88.1% | 79.6% |
| 3egqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 44.0 | 3.59e-01 | 90.5% | 80.5% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.87e-01 | 98.8% | 84.2% |
| 3kheA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 44.0 | 4.14e-01 | 98.8% | 100.0% |
| 1irjA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 37.0 | 3.79e-01 | 79.8% | 77.6% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 44.0 | 3.35e-01 | 100.0% | 51.2% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065632 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 69.0 | 6.44e-01 | 92.9% | 68.0% |
| 4992317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 68.0 | 5.83e-01 | 91.7% | 53.6% |
| 4935618 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 63.0 | 6.08e-01 | 92.9% | 67.4% |
| 3221607 | 101.1.2.160 ↗ | alpha arrays › HTH › HTH › winged helix domain › BLACT_WH | 0.86 | 64.0 | 7.30e-01 | 83.3% | 100.0% |
| 5044358 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 64.0 | 7.14e-01 | 90.5% | 100.0% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.85 | 67.0 | 6.75e-01 | 92.9% | 81.2% |
| 5053927 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.85 | 63.0 | 5.22e-01 | 90.5% | 46.4% |
| 4167856 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.85 | 66.0 | 6.63e-01 | 91.7% | 80.0% |
| 5056734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 70.0 | 6.16e-01 | 90.5% | 62.6% |
| 3381711 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.85 | 67.0 | 6.12e-01 | 88.1% | 65.7% |
| 3677001 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.84 | 63.0 | 6.01e-01 | 83.3% | 68.4% |
| 5057164 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 68.0 | 6.37e-01 | 90.5% | 72.0% |
| 3905943 | 101.1.2.107 ↗ | alpha arrays › HTH › HTH › winged helix domain › STN1_2 | 0.83 | 69.0 | 7.37e-01 | 86.9% | 100.0% |
| 3706397 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 62.0 | 6.94e-01 | 86.9% | 100.0% |
| 4992111 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.83 | 67.0 | 5.57e-01 | 98.8% | 52.6% |
| 5052425 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 60.0 | 5.85e-01 | 86.9% | 70.0% |
| 5035859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 62.0 | 6.58e-01 | 89.3% | 89.2% |
| 3814573 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 69.0 | 6.38e-01 | 95.2% | 71.4% |
| 4393250 | 101.1.2.107 ↗ | alpha arrays › HTH › HTH › winged helix domain › STN1_2 | 0.82 | 67.0 | 7.09e-01 | 85.7% | 96.0% |
| 5013996 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 64.0 | 6.79e-01 | 89.3% | 92.0% |
| 5027410 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.81 | 59.0 | 5.69e-01 | 91.7% | 67.4% |
| 4217857 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 60.0 | 6.65e-01 | 90.5% | 100.0% |
| 4191159 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 56.0 | 6.46e-01 | 84.5% | 100.0% |
| 3514596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 66.0 | 6.63e-01 | 85.7% | 87.1% |
| 3809378 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.81 | 64.0 | 6.92e-01 | 95.2% | 100.0% |
| 3372110 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.81 | 64.0 | 6.98e-01 | 91.7% | 100.0% |
| 3808802 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.80 | 65.0 | 6.82e-01 | 91.7% | 96.0% |
| 4933412 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.80 | 62.0 | 5.12e-01 | 90.5% | 47.6% |
| 3489856 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 63.0 | 6.48e-01 | 89.3% | 87.5% |
| 5030693 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 65.0 | 5.99e-01 | 92.9% | 68.6% |
| 4096444 | 101.1.2.59 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF480 | 0.80 | 65.0 | 6.70e-01 | 85.7% | 97.5% |
| 3398923 | 101.1.2.248 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF4777 | 0.80 | 64.0 | 6.56e-01 | 94.0% | 88.7% |
| 5000771 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 58.0 | 6.49e-01 | 84.5% | 100.0% |
| 4094027 | 101.1.2.59 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF480 | 0.79 | 66.0 | 6.62e-01 | 88.1% | 94.1% |
| 3587524 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 67.0 | 6.31e-01 | 92.9% | 76.0% |
| 5033207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 68.0 | 5.84e-01 | 90.5% | 60.8% |
| 3653189 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.79 | 59.0 | 6.59e-01 | 82.1% | 100.0% |
| 3643333 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.79 | 66.0 | 6.51e-01 | 95.2% | 83.3% |
| 4044122 | 101.1.2.59 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF480 | 0.79 | 67.0 | 6.60e-01 | 90.5% | 96.7% |
| 5075915 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 6.39e-01 | 96.4% | 84.7% |
| 3812293 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.79 | 68.0 | 6.69e-01 | 91.7% | 86.7% |
| 4941477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 65.0 | 6.12e-01 | 90.5% | 74.0% |
| 3554971 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.78 | 67.0 | 6.70e-01 | 90.5% | 90.6% |
| 3741636 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 64.0 | 6.20e-01 | 92.9% | 78.5% |
| 3219983 | 101.1.2.200 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_65 | 0.78 | 67.0 | 6.25e-01 | 91.7% | 80.0% |
| 3401200 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 63.0 | 6.09e-01 | 86.9% | 77.9% |
| 3618188 | 101.1.2.265 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stork_head | 0.77 | 63.0 | 5.68e-01 | 90.5% | 65.5% |
| 3462112 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.77 | 67.0 | 6.74e-01 | 96.4% | 91.8% |
| 4959343 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.77 | 65.0 | 6.40e-01 | 90.5% | 90.0% |
| 5006986 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.77 | 62.0 | 5.70e-01 | 96.4% | 68.6% |
| 5021067 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 59.0 | 5.50e-01 | 90.5% | 65.7% |
| 4139936 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.76 | 64.0 | 6.46e-01 | 94.0% | 89.4% |
| 3230219 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.76 | 66.0 | 6.65e-01 | 94.0% | 92.9% |
| 4236937 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 48.0 | 5.60e-01 | 72.6% | 91.7% |
| 4606139 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 6.37e-01 | 88.1% | 95.0% |
| 4976218 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.75 | 67.0 | 5.84e-01 | 94.0% | 68.3% |
| 4933566 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.98e-01 | 92.9% | 81.0% |
| 4933514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 4.90e-01 | 92.9% | 50.0% |
| 5000306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 64.0 | 6.38e-01 | 96.4% | 91.8% |
| 3876302 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.75 | 62.0 | 5.70e-01 | 91.7% | 70.5% |
| 3275918 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 58.0 | 6.25e-01 | 91.7% | 100.0% |
| 4979532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 6.06e-01 | 96.4% | 90.0% |
| 4940719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 64.0 | 5.16e-01 | 92.9% | 54.9% |
| 3955695 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.74 | 64.0 | 5.75e-01 | 91.7% | 73.6% |
| 5029177 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.74 | 62.0 | 5.87e-01 | 90.5% | 82.0% |
| 3597985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 57.0 | 5.89e-01 | 89.3% | 86.3% |
| 4996559 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 6.26e-01 | 85.7% | 100.0% |
| 3937849 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.73 | 60.0 | 6.12e-01 | 86.9% | 100.0% |
| 4107264 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.53e-01 | 91.7% | 84.3% |
| 5028531 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.88e-01 | 89.3% | 81.1% |
| 4025713 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.73 | 57.0 | 6.01e-01 | 89.3% | 93.2% |
| 4994527 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 6.20e-01 | 96.4% | 93.8% |
| 3988923 | 101.1.2.158 ↗ | alpha arrays › HTH › HTH › winged helix domain › DpnI_C | 0.73 | 59.0 | 6.21e-01 | 88.1% | 97.3% |
| 4934434 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.05e-01 | 96.4% | 52.4% |
| 5064032 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 57.0 | 6.11e-01 | 91.7% | 100.0% |
| 2410027 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.73 | 49.0 | 5.22e-01 | 92.9% | 79.7% |
| 3626211 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 64.0 | 6.18e-01 | 96.4% | 90.5% |
| 3613393 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 57.0 | 5.90e-01 | 91.7% | 90.0% |
| 5007356 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 62.0 | 4.15e-01 | 96.4% | 73.1% |
| 4525548 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 58.0 | 5.46e-01 | 92.9% | 73.0% |
| 4991791 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 59.0 | 5.68e-01 | 95.2% | 78.9% |
| 5061613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 5.98e-01 | 96.4% | 91.8% |
| 3356805 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 59.0 | 4.23e-01 | 90.5% | 33.2% |
| 3622328 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.70 | 56.0 | 5.95e-01 | 86.9% | 98.6% |
| 4927328 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.61e-01 | 90.5% | 82.1% |
| 3027876 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.69 | 60.0 | 6.06e-01 | 96.4% | 96.4% |
| 4957942 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 49.0 | 5.32e-01 | 94.0% | 90.0% |
| 3946399 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 4.87e-01 | 91.7% | 63.1% |
| 3675610 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.65 | 54.0 | 4.99e-01 | 90.5% | 75.2% |
| 4994947 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 5.20e-01 | 91.7% | 90.0% |
| 3247967 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.63 | 45.0 | 4.45e-01 | 90.5% | 70.0% |
| 3518589 | 101.1.2.591 ↗ | alpha arrays › HTH › HTH › winged helix domain › ssDNA_TraI_N | 0.63 | 52.0 | 3.60e-01 | 90.5% | 85.9% |
| 5045249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 5.23e-01 | 92.9% | 98.8% |
| 4464727 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.61 | 50.0 | 4.67e-01 | 89.3% | 80.8% |
| 3884426 | 101.1.2.375 ↗ | alpha arrays › HTH › HTH › winged helix domain › MOV-10_N | 0.61 | 51.0 | 5.18e-01 | 100.0% | 100.0% |
| 5053823 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.58 | 44.0 | 2.84e-01 | 81.0% | 18.1% |
| 4361463 | 101.19.1.1 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C | 0.55 | 43.0 | 4.19e-01 | 96.4% | 76.0% |
D2
high
residues 97-171
D3
medium
residues 173-249_316-373
D4
medium
residues 250-315
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 44.0 | 4.65e-01 | 75.8% | 73.3% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 46.0 | 3.67e-01 | 77.3% | 37.7% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.66 | 54.0 | 5.39e-01 | 92.4% | 91.2% |
| 8gr7A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 57.0 | 3.67e-01 | 98.5% | 81.9% |
| 4ymuD00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.65 | 51.0 | 3.66e-01 | 89.4% | 29.8% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 45.0 | 4.40e-01 | 90.9% | 66.2% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 45.0 | 3.94e-01 | 77.3% | 49.5% |
| 6vydA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 54.0 | 3.57e-01 | 98.5% | 82.9% |
| 2m6bA00 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.63 | 51.0 | 4.07e-01 | 93.9% | 87.3% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 46.0 | 4.38e-01 | 83.3% | 65.4% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 42.0 | 4.36e-01 | 77.3% | 76.7% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 51.0 | 4.79e-01 | 97.0% | 81.2% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 44.0 | 3.88e-01 | 77.3% | 85.4% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 44.0 | 4.02e-01 | 78.8% | 69.3% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 44.0 | 4.08e-01 | 80.3% | 64.7% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 43.0 | 4.38e-01 | 83.3% | 81.0% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.59 | 43.0 | 4.39e-01 | 78.8% | 87.7% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.58 | 39.0 | 3.63e-01 | 78.8% | 51.7% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 45.0 | 3.70e-01 | 83.3% | 46.6% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 42.0 | 3.29e-01 | 77.3% | 39.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 47.0 | 3.63e-01 | 90.9% | 41.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.56 | 43.0 | 4.14e-01 | 83.3% | 93.5% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 43.0 | 4.00e-01 | 80.3% | 90.1% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.56 | 43.0 | 4.02e-01 | 83.3% | 67.1% |
| 2ex3B02 | 1.20.1270.230 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain | 0.56 | 37.0 | 3.56e-01 | 74.2% | 56.8% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.55 | 43.0 | 4.20e-01 | 86.4% | 87.8% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 42.0 | 4.22e-01 | 83.3% | 79.7% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 45.0 | 4.29e-01 | 92.4% | 79.5% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 47.0 | 3.42e-01 | 100.0% | 36.1% |
| 1yf2A02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.55 | 42.0 | 3.65e-01 | 83.3% | 71.0% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.54 | 41.0 | 4.21e-01 | 89.4% | 82.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.54 | 41.0 | 4.23e-01 | 83.3% | 89.1% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 42.0 | 4.24e-01 | 84.8% | 92.6% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 40.0 | 3.99e-01 | 80.3% | 79.1% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 44.0 | 3.83e-01 | 90.9% | 64.3% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.52 | 44.0 | 3.26e-01 | 97.0% | 83.2% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 38.0 | 3.55e-01 | 80.3% | 66.3% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.51 | 41.0 | 3.63e-01 | 92.4% | 58.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4996722 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.75 | 61.0 | 5.35e-01 | 92.4% | 61.1% |
| 1268315 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.72 | 46.0 | 3.69e-01 | 71.2% | 35.0% |
| 3513988 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.67 | 44.0 | 3.60e-01 | 77.3% | 37.5% |
| 3841680 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.67 | 44.0 | 3.52e-01 | 77.3% | 34.6% |
| 3692704 | 5069.1.3.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CybS | 0.67 | 57.0 | 4.71e-01 | 93.9% | 61.7% |
| 4970333 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.67 | 55.0 | 4.90e-01 | 90.9% | 63.2% |
| 4945061 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.65 | 55.0 | 3.91e-01 | 93.9% | 32.0% |
| 2674763 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.65 | 45.0 | 4.38e-01 | 90.9% | 65.3% |
| 3603021 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.64 | 54.0 | 3.56e-01 | 98.5% | 21.3% |
| 4075392 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 55.0 | 3.73e-01 | 98.5% | 29.4% |
| 3317016 | 150.5.1.102 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PF28483 | 0.63 | 52.0 | 5.18e-01 | 90.9% | 94.1% |
| 3749294 | 605.1.1.177 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF27917 | 0.62 | 45.0 | 3.99e-01 | 77.3% | 60.0% |
| 4320306 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.61 | 42.0 | 3.55e-01 | 74.2% | 42.7% |
| 3428852 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 46.0 | 3.74e-01 | 84.8% | 44.4% |
| 4250162 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.60 | 45.0 | 3.58e-01 | 90.9% | 38.5% |
| 4934657 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.60 | 49.0 | 3.68e-01 | 89.4% | 81.2% |
| 5014971 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.60 | 50.0 | 3.61e-01 | 97.0% | 32.1% |
| 3750377 | 605.1.1.254 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MRVI1 | 0.59 | 49.0 | 4.69e-01 | 97.0% | 95.0% |
| 2663455 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.58 | 47.0 | 4.72e-01 | 89.4% | 91.2% |
| 3951780 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.58 | 52.0 | 3.17e-01 | 100.0% | 21.9% |
| 3528259 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.58 | 42.0 | 4.21e-01 | 77.3% | 78.3% |
| 4497098 | 3291.1.1.195 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim | 0.57 | 45.0 | 3.70e-01 | 84.8% | 50.8% |
| 4429833 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.57 | 43.0 | 3.64e-01 | 84.8% | 48.2% |
| 3253427 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.56 | 43.0 | 4.00e-01 | 84.8% | 69.3% |
| 4927769 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 43.0 | 3.88e-01 | 83.3% | 79.6% |
| 4442769 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 45.0 | 3.59e-01 | 93.9% | 79.3% |
| 4601944 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 43.0 | 4.16e-01 | 83.3% | 80.0% |
| 4587769 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.56 | 42.0 | 4.24e-01 | 78.8% | 81.5% |
| 3509826 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 42.0 | 3.44e-01 | 83.3% | 60.8% |
| 3932692 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.56 | 40.0 | 3.66e-01 | 77.3% | 58.9% |
| 3387484 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.55 | 44.0 | 4.06e-01 | 87.9% | 95.3% |
| 3476064 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.55 | 48.0 | 4.00e-01 | 100.0% | 93.3% |
| 3890044 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 43.0 | 4.28e-01 | 84.8% | 92.6% |
| 3477349 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 46.0 | 3.99e-01 | 93.9% | 69.5% |
| 1716505 | 1189.1.1.3 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › GARP | 0.52 | 44.0 | 3.26e-01 | 97.0% | 83.2% |
| 3497897 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.51 | 42.0 | 4.12e-01 | 89.4% | 90.0% |