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NC_019420.1__YP_006990475.1__D877_gp45__00045

Bact-Vir

NC_019420.1__YP_006990475.1__D877_gp45__00045

Identity

Accession:
NC_019420 ↗
Kingdom:
phage

Quality

69.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-148_230-262
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24175.3 best SU10_adaptor 40.9 4.60e-10 97.3% 45.1%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i0dA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 40.0 4.11e-01 83.1% 57.6%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 33.0 3.82e-01 90.5% 79.8%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.51 32.0 3.85e-01 89.9% 95.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081050 4275.1.1.11 alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › SU10_adaptor 0.75 55.0 4.89e-01 100.0% 55.5%
1031170 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.73 40.0 4.14e-01 82.4% 56.4%
5027244 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 29.0 4.27e-01 79.7% 98.3%
144662 10.2.1.31 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.50 31.0 3.84e-01 90.5% 100.0%
D2 medium residues 149-229
PDB