←Back to structures
NC_019420.1__YP_006990475.1__D877_gp45__00045
Bact-VirNC_019420.1__YP_006990475.1__D877_gp45__00045
Identity
- Accession:
- NC_019420 ↗
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Taxonomy
TaxID: 1244856
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-148_230-262
Domain cluster:
rep: NC_023863.2__YP_009021671.1__CHOED_05__00005__D58-166
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24175.3 best | SU10_adaptor | 40.9 | 4.60e-10 | 97.3% | 45.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i0dA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.71 | 40.0 | 4.11e-01 | 83.1% | 57.6% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 33.0 | 3.82e-01 | 90.5% | 79.8% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.51 | 32.0 | 3.85e-01 | 89.9% | 95.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081050 | 4275.1.1.11 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › SU10_adaptor | 0.75 | 55.0 | 4.89e-01 | 100.0% | 55.5% |
| 1031170 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.73 | 40.0 | 4.14e-01 | 82.4% | 56.4% |
| 5027244 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 29.0 | 4.27e-01 | 79.7% | 98.3% |
| 144662 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.50 | 31.0 | 3.84e-01 | 90.5% | 100.0% |
D2
medium
residues 149-229