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NC_019447.1__YP_007002077.1__F355_gp11__00011
Bact-VirNC_019447.1__YP_007002077.1__F355_gp11__00011
Identity
- Accession:
- NC_019447 ↗
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
rep: MG592599.1__AUR96971.1__NVP1235O_38__00038__D78-125
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 3.96e-01 | 100.0% | 49.3% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 54.0 | 4.57e-01 | 96.1% | 78.0% |
| 2jtcA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.65 | 49.0 | 3.27e-01 | 90.2% | 33.6% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 4.84e-01 | 92.2% | 89.4% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 49.0 | 3.66e-01 | 82.4% | 35.3% |
| 1dkiC01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.64 | 49.0 | 3.42e-01 | 90.2% | 39.2% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 40.0 | 3.50e-01 | 82.4% | 39.3% |
| 3g8qA01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.63 | 33.0 | 2.52e-01 | 78.4% | 21.2% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.63 | 41.0 | 2.61e-01 | 80.4% | 12.8% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.63 | 49.0 | 4.31e-01 | 90.2% | 67.5% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.62 | 49.0 | 3.73e-01 | 94.1% | 69.6% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 3.55e-01 | 72.5% | 44.8% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 3.65e-01 | 84.3% | 80.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 4.74e-01 | 100.0% | 95.5% |
| 1bquA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 46.0 | 3.69e-01 | 84.3% | 65.7% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 3.97e-01 | 84.3% | 77.6% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 4.12e-01 | 98.0% | 80.4% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 3.86e-01 | 92.2% | 63.2% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.60 | 46.0 | 3.88e-01 | 90.2% | 67.0% |
| 3kalB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.60 | 47.0 | 4.56e-01 | 90.2% | 83.1% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.52e-01 | 74.5% | 46.5% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 46.0 | 3.78e-01 | 84.3% | 77.2% |
| 1m2gA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.59 | 45.0 | 3.92e-01 | 92.2% | 76.3% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 3.77e-01 | 90.2% | 71.4% |
| 3s98A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 3.91e-01 | 84.3% | 70.7% |
| 7u7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 3.78e-01 | 88.2% | 75.3% |
| 8bvoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 3.93e-01 | 88.2% | 77.9% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.46e-01 | 80.4% | 75.5% |
| 1neuA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 3.66e-01 | 90.2% | 80.9% |
| 1oeyA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 48.0 | 4.23e-01 | 100.0% | 95.1% |
| 3fzqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.57 | 43.0 | 3.52e-01 | 90.2% | 67.8% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 46.0 | 3.46e-01 | 94.1% | 65.0% |
| 4rs1B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.44e-01 | 82.4% | 70.9% |
| 2e4tA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 47.0 | 3.66e-01 | 96.1% | 70.2% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 47.0 | 3.44e-01 | 96.1% | 79.7% |
| 2vtfA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 46.0 | 3.25e-01 | 96.1% | 87.6% |
| 8dwoK02 | 2.60.40.4310 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain B | 0.56 | 41.0 | 3.89e-01 | 82.4% | 84.4% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.53e-01 | 84.3% | 78.5% |
| 6grqA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.45e-01 | 84.3% | 76.8% |
| 3lb6C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.55e-01 | 84.3% | 71.6% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.38e-01 | 80.4% | 81.7% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 37.0 | 3.76e-01 | 70.6% | 94.0% |
| 1n26A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.38e-01 | 84.3% | 75.0% |
| 1f6fB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.43e-01 | 84.3% | 78.4% |
| 3lb6D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.38e-01 | 80.4% | 75.0% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 43.0 | 3.69e-01 | 88.2% | 94.0% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 46.0 | 3.59e-01 | 94.1% | 60.2% |
| 2gnrA01 | 6.10.30.10 | Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.55 | 37.0 | 3.47e-01 | 72.5% | 60.9% |
| 1m4kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.37e-01 | 84.3% | 75.5% |
| 2jllA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.36e-01 | 84.3% | 76.5% |
| 2b39A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 3.19e-01 | 86.3% | 75.0% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.07e-01 | 92.2% | 41.7% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.53 | 43.0 | 3.00e-01 | 92.2% | 64.0% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 42.0 | 3.26e-01 | 90.2% | 50.9% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.52 | 45.0 | 3.70e-01 | 98.0% | 60.0% |
| 7ox5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.30e-01 | 88.2% | 71.8% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.52 | 44.0 | 3.69e-01 | 94.1% | 88.6% |
| 1c4pC00 | 3.10.20.180 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 40.0 | 3.11e-01 | 90.2% | 68.9% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3670750 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 40.0 | 2.92e-01 | 74.5% | 20.8% |
| 5082704 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.70 | 43.0 | 2.84e-01 | 80.4% | 16.4% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 4.83e-01 | 100.0% | 91.3% |
| 5047239 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 4.71e-01 | 86.3% | 98.4% |
| 396031 | 4.22.1.1 ↗ | beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom | 0.65 | 54.0 | 4.38e-01 | 96.1% | 69.3% |
| 4034320 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.64 | 46.0 | 4.37e-01 | 84.3% | 97.1% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.64 | 44.0 | 3.05e-01 | 92.2% | 21.8% |
| 5054122 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 43.0 | 3.08e-01 | 92.2% | 23.1% |
| 5026583 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.60 | 42.0 | 3.73e-01 | 74.5% | 54.7% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.60 | 44.0 | 3.09e-01 | 96.1% | 24.1% |
| 3964735 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.60 | 51.0 | 3.06e-01 | 100.0% | 16.5% |
| 4974744 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.60 | 42.0 | 2.90e-01 | 92.2% | 21.7% |
| 3919987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 48.0 | 3.77e-01 | 90.2% | 60.9% |
| 3922996 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.59 | 48.0 | 3.64e-01 | 90.2% | 91.2% |
| 4234915 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.59 | 50.0 | 3.89e-01 | 96.1% | 61.7% |
| 3899215 | 11.1.1.850 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28354 | 0.59 | 48.0 | 3.76e-01 | 90.2% | 60.9% |
| 3177995 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.59 | 51.0 | 2.94e-01 | 100.0% | 40.4% |
| 3098973 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 45.0 | 3.64e-01 | 84.3% | 68.9% |
| 4854035 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 3.69e-01 | 74.5% | 74.0% |
| 3435593 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.59 | 45.0 | 3.70e-01 | 90.2% | 62.7% |
| 3582490 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 3.60e-01 | 80.4% | 67.4% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.59 | 49.0 | 3.88e-01 | 96.1% | 64.5% |
| 142425 | 11.1.1.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-APP,V-set | 0.59 | 49.0 | 3.66e-01 | 92.2% | 61.9% |
| 4403519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 3.20e-01 | 86.3% | 39.4% |
| 3398492 | 11.1.1.610 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_DSCAM-DSCAML_C | 0.58 | 46.0 | 3.73e-01 | 90.2% | 67.6% |
| 3223701 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.67e-01 | 88.2% | 73.3% |
| 3913354 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.71e-01 | 84.3% | 73.3% |
| 3929133 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.80e-01 | 90.2% | 86.3% |
| 4942891 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.54e-01 | 84.3% | 69.5% |
| 5078708 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.57 | 39.0 | 3.56e-01 | 100.0% | 49.3% |
| 3502521 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 3.36e-01 | 92.2% | 58.1% |
| 4880604 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.57 | 46.0 | 3.38e-01 | 92.2% | 50.0% |
| 2553542 | 188.1.1.2 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep,SRC-1 | 0.57 | 47.0 | 2.91e-01 | 92.2% | 79.5% |
| 3798318 | 1207.1.1.0 ↗ | a+b two layers › MTHFR SAM-binding regulatory domain › MTHFR SAM-binding regulatory domain › MTHFR SAM-binding regulatory domain | 0.57 | 41.0 | 2.56e-01 | 96.1% | 13.3% |
| 160388 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.57 | 48.0 | 3.65e-01 | 96.1% | 57.3% |
| 4282202 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 46.0 | 3.60e-01 | 96.1% | 70.8% |
| 3232673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.96e-01 | 100.0% | 71.0% |
| 4081896 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 48.0 | 3.71e-01 | 100.0% | 95.0% |
| 3748555 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.56 | 41.0 | 3.27e-01 | 82.4% | 65.2% |
| 4944078 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 3.59e-01 | 88.2% | 73.0% |
| 3907835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 43.0 | 3.49e-01 | 84.3% | 67.0% |
| 4547930 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 46.0 | 3.66e-01 | 98.0% | 74.8% |
| 4218569 | 10.32.1.301 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › InhA-like_MAM | 0.55 | 48.0 | 3.38e-01 | 100.0% | 80.6% |
| 3552388 | 11.1.1.334 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TSLPR_D1 | 0.55 | 46.0 | 3.84e-01 | 98.0% | 83.2% |
| 5038720 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 39.0 | 3.09e-01 | 80.4% | 89.2% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 44.0 | 2.81e-01 | 92.2% | 24.6% |
| 3397959 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 40.0 | 3.16e-01 | 84.3% | 65.0% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 40.0 | 2.77e-01 | 96.1% | 22.7% |
| 4233833 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 41.0 | 2.53e-01 | 100.0% | 12.1% |
| 1871771 | 1.1.5.43 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MrkH_YcgR_like | 0.53 | 40.0 | 3.33e-01 | 92.2% | 57.7% |
| 5004573 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.53 | 45.0 | 3.23e-01 | 96.1% | 91.9% |
| 4493566 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.52 | 42.0 | 3.43e-01 | 100.0% | 67.0% |
| 2389702 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.52 | 40.0 | 3.36e-01 | 98.0% | 64.9% |
| 4539244 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.52 | 39.0 | 3.30e-01 | 92.2% | 62.9% |
| 3920481 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 38.0 | 2.65e-01 | 84.3% | 38.0% |
| 4578778 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 38.0 | 2.29e-01 | 84.3% | 18.1% |
| 195822 | 1.1.5.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like | 0.51 | 39.0 | 2.98e-01 | 98.0% | 43.8% |
| 3241065 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 37.0 | 3.14e-01 | 84.3% | 72.0% |
D2
high
residues 64-126
Domain cluster:
rep: NC_052660.1__YP_009986652.1__JR325_gp173__00276__D78-150
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qwyA01 | 2.40.50.290 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 37.0 | 3.72e-01 | 96.8% | 53.2% |
| 3i10A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.53 | 40.0 | 2.71e-01 | 84.1% | 39.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.37e-01 | 88.9% | 48.5% |
| 1o1zA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 40.0 | 2.88e-01 | 88.9% | 43.8% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 43.0 | 4.34e-01 | 90.5% | 87.7% |
| 3ks6A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 40.0 | 2.85e-01 | 90.5% | 44.4% |
| 3ch0A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 43.0 | 2.93e-01 | 98.4% | 60.7% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.06e-01 | 90.5% | 87.9% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.87e-01 | 87.3% | 91.8% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 4.01e-01 | 90.5% | 80.9% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 4.08e-01 | 90.5% | 92.7% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 40.0 | 2.57e-01 | 87.3% | 84.5% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 40.0 | 3.88e-01 | 88.9% | 79.5% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.50 | 34.0 | 3.35e-01 | 74.6% | 90.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3383054 | 221.1.2.20 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e | 0.56 | 31.0 | 3.86e-01 | 71.4% | 97.1% |
| 4976701 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.20e-01 | 90.5% | 90.0% |
| 4013632 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 3.93e-01 | 88.9% | 75.6% |
| 3788565 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.52 | 43.0 | 3.78e-01 | 88.9% | 72.2% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.52 | 34.0 | 3.65e-01 | 88.9% | 78.2% |
| 3602785 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 4.06e-01 | 88.9% | 86.7% |
| 4934755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.97e-01 | 88.9% | 78.6% |
| 4076879 | 4.1.1.87 ↗ | beta barrels › SH3 › SH3 › SH3 › FLgD_tudor | 0.51 | 32.0 | 3.53e-01 | 77.8% | 80.0% |
| 3634374 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.51 | 35.0 | 3.84e-01 | 88.9% | 92.0% |
| 3492423 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.59e-01 | 95.2% | 84.3% |
| 4010995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 41.0 | 3.87e-01 | 88.9% | 88.0% |