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NC_019447.1__YP_007002082.1__F355_gp16__00016

Bact-Vir

Identity

Accession:: NC_019447 ↗
Kingdom:: phage

Quality

67.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Perisivirus› Brucella_phage_Pr

TaxID: 1133293

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 264-332

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2v6zM00	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.63	46.0	4.51e-01	76.8%	81.3%
4cc9B00	1.20.5.4730	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.62	43.0	3.86e-01	72.5%	60.2%
8d3mA02	1.20.120.920	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain	0.61	51.0	3.64e-01	100.0%	49.2%
1ls1A01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.60	47.0	4.32e-01	84.1%	71.9%
4gouA03	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.59	45.0	3.30e-01	82.6%	71.6%
3sykA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.57	44.0	4.07e-01	84.1%	65.6%
1k04A02	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.55	47.0	4.09e-01	94.2%	93.3%
1x42A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.51	39.0	3.75e-01	88.4%	78.3%
3m9vA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.51	36.0	2.79e-01	75.4%	61.8%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5063791	1075.3.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1	0.61	47.0	3.09e-01	87.0%	91.3%
3262801	3788.1.1.0 ↗	alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr)	0.57	45.0	3.70e-01	85.5%	56.8%
3243410	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.57	43.0	3.38e-01	84.1%	86.9%
3957690	6026.1.1.55 ↗	alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › Transposase_mut	0.54	37.0	3.37e-01	79.7%	51.6%
3947340	5069.1.1.63 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › SirB	0.54	43.0	3.58e-01	89.9%	71.2%
3036200	108.2.1.0 ↗	alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins	0.53	38.0	3.22e-01	78.3%	50.4%
4265058	192.15.1.73 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GrpE	0.52	34.0	2.84e-01	84.1%	38.3%
3617382	4336.2.1.1 ↗	alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2	0.51	37.0	3.45e-01	78.3%	74.4%
3997160	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.51	40.0	3.60e-01	88.4%	83.0%
3582573	192.24.1.0 ↗	alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain	0.50	41.0	3.45e-01	85.5%	63.6%