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NC_019457.1__YP_007003068.1__F353_gp28__00028
Bact-VirNC_019457.1__YP_007003068.1__F353_gp28__00028
Identity
- Accession:
- NC_019457 ↗
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-54
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.73 | 61.0 | 5.23e-01 | 100.0% | 75.4% |
| 1jv2B04 | 4.10.1240.30 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.72 | 50.0 | 3.92e-01 | 75.0% | 40.7% |
| 2bn8A00 | 3.30.730.20 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › Cell division activator CedA | 0.70 | 57.0 | 4.91e-01 | 100.0% | 56.7% |
| 1gccA00 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.69 | 57.0 | 5.07e-01 | 100.0% | 66.7% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.68 | 46.0 | 4.11e-01 | 82.5% | 49.1% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 45.0 | 3.88e-01 | 85.0% | 46.0% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 52.0 | 4.50e-01 | 100.0% | 58.2% |
| 4jzsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 46.0 | 3.10e-01 | 85.0% | 59.5% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 44.0 | 3.18e-01 | 87.5% | 64.7% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.60 | 49.0 | 3.51e-01 | 100.0% | 48.9% |
| 3laeA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 40.0 | 3.32e-01 | 72.5% | 35.8% |
| 2aehA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 45.0 | 3.57e-01 | 100.0% | 38.7% |
| 3dghA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 43.0 | 3.13e-01 | 90.0% | 27.6% |
| 3uw8A02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.58 | 47.0 | 3.37e-01 | 100.0% | 33.6% |
| 3r4qA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 39.0 | 2.80e-01 | 72.5% | 22.7% |
| 4krgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 2.54e-01 | 80.0% | 19.7% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.25e-01 | 100.0% | 37.8% |
| 2g7hA01 | 3.30.160.460 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 40.0 | 3.44e-01 | 85.0% | 44.7% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 42.0 | 3.71e-01 | 100.0% | 55.7% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 43.0 | 2.87e-01 | 100.0% | 19.8% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.55 | 40.0 | 3.81e-01 | 95.0% | 66.7% |
| 4bbyA02 | 3.30.160.650 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 39.0 | 3.81e-01 | 82.5% | 70.5% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.55 | 41.0 | 2.88e-01 | 97.5% | 34.3% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.54 | 42.0 | 3.72e-01 | 100.0% | 59.2% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 43.0 | 3.39e-01 | 97.5% | 43.4% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 40.0 | 3.14e-01 | 92.5% | 60.2% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 42.0 | 3.16e-01 | 97.5% | 39.5% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 3.03e-01 | 100.0% | 31.9% |
| 4rt5A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 37.0 | 2.90e-01 | 75.0% | 30.7% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.19e-01 | 95.0% | 55.7% |
| 3h79A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 39.0 | 3.15e-01 | 100.0% | 79.1% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 41.0 | 3.31e-01 | 100.0% | 66.3% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 42.0 | 3.90e-01 | 100.0% | 75.9% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.51 | 39.0 | 3.04e-01 | 92.5% | 52.8% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.50 | 42.0 | 2.76e-01 | 100.0% | 59.6% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 37.0 | 2.75e-01 | 92.5% | 34.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.85 | 77.0 | 6.84e-01 | 100.0% | 72.7% |
| 4966261 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.81 | 66.0 | 5.67e-01 | 100.0% | 56.9% |
| 4956347 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.80 | 67.0 | 5.20e-01 | 100.0% | 43.3% |
| 3446455 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.78 | 52.0 | 5.48e-01 | 92.5% | 80.0% |
| 5028523 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.78 | 62.0 | 5.36e-01 | 100.0% | 56.9% |
| 3974688 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.78 | 67.0 | 6.30e-01 | 100.0% | 84.0% |
| 5075488 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.77 | 62.0 | 5.28e-01 | 100.0% | 54.4% |
| 4033828 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.71 | 50.0 | 4.91e-01 | 100.0% | 68.9% |
| 5013333 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.71 | 50.0 | 5.15e-01 | 100.0% | 85.7% |
| 3671924 | 4325.1.1.12 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › AP2 | 0.71 | 56.0 | 5.68e-01 | 92.5% | 94.9% |
| 3300456 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.70 | 59.0 | 4.50e-01 | 100.0% | 75.0% |
| 3533688 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.70 | 61.0 | 4.98e-01 | 100.0% | 53.3% |
| 3210730 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 47.0 | 4.90e-01 | 70.0% | 91.4% |
| 3671921 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.69 | 57.0 | 5.24e-01 | 100.0% | 70.9% |
| 3797569 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 52.0 | 4.85e-01 | 97.5% | 70.9% |
| 3512778 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.65 | 54.0 | 4.22e-01 | 100.0% | 80.0% |
| 4055542 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.64 | 51.0 | 3.77e-01 | 100.0% | 50.8% |
| 3969097 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.64 | 51.0 | 4.88e-01 | 100.0% | 78.0% |
| 5022899 | 896.1.1.8 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DUF1678 | 0.64 | 53.0 | 4.14e-01 | 100.0% | 70.2% |
| 4928056 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 50.0 | 4.79e-01 | 100.0% | 80.0% |
| 4021330 | 304.37.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 | 0.62 | 51.0 | 4.22e-01 | 100.0% | 91.3% |
| 3348909 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.62 | 39.0 | 2.44e-01 | 82.5% | 10.2% |
| 3384982 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 42.0 | 3.16e-01 | 72.5% | 30.5% |
| 4989084 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.61 | 44.0 | 3.95e-01 | 100.0% | 53.3% |
| 3973145 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 46.0 | 4.19e-01 | 87.5% | 60.0% |
| 3225123 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 47.0 | 4.59e-01 | 100.0% | 80.0% |
| 3615163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 50.0 | 3.81e-01 | 100.0% | 38.3% |
| 3514864 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 43.0 | 3.98e-01 | 82.5% | 60.0% |
| 3371393 | 4266.2.1.1 ↗ | alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 | 0.59 | 45.0 | 2.94e-01 | 85.0% | 19.7% |
| 3241998 | 377.11.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › THAP domain › THAP domain | 0.58 | 44.0 | 3.23e-01 | 100.0% | 73.1% |
| 3476644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 4.33e-01 | 95.0% | 85.0% |
| 4937843 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.57 | 47.0 | 2.77e-01 | 97.5% | 18.1% |
| 3742995 | 304.9.1.165 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › eIF3g | 0.55 | 38.0 | 3.98e-01 | 75.0% | 97.1% |
| 3509521 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 41.0 | 2.99e-01 | 95.0% | 74.0% |
| 3938601 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.54 | 45.0 | 3.54e-01 | 100.0% | 66.3% |
| 3267950 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.54 | 43.0 | 2.91e-01 | 100.0% | 44.9% |
| 3502044 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.53 | 36.0 | 2.81e-01 | 72.5% | 30.5% |
| 4944386 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 40.0 | 3.02e-01 | 87.5% | 36.4% |
| 3293481 | 861.1.1.1 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi | 0.51 | 35.0 | 2.64e-01 | 77.5% | 28.8% |
| 4048663 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.51 | 34.0 | 3.40e-01 | 70.0% | 64.4% |
| 3504964 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 38.0 | 3.81e-01 | 90.0% | 100.0% |
| 3925471 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.50 | 39.0 | 3.54e-01 | 100.0% | 61.7% |
D2
medium
residues 59-105
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.83 | 71.0 | 6.20e-01 | 100.0% | 65.3% |
| 1evsA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.82 | 73.0 | 4.97e-01 | 100.0% | 36.2% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.80 | 63.0 | 6.32e-01 | 91.5% | 85.4% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.79 | 68.0 | 5.86e-01 | 100.0% | 66.2% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.79 | 68.0 | 4.64e-01 | 100.0% | 28.0% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 65.0 | 6.04e-01 | 97.9% | 77.8% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 67.0 | 5.84e-01 | 100.0% | 68.5% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 67.0 | 6.00e-01 | 100.0% | 71.6% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 65.0 | 5.89e-01 | 100.0% | 77.3% |
| 2q1kA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.75 | 61.0 | 5.99e-01 | 93.6% | 88.5% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 65.0 | 4.00e-01 | 97.9% | 22.4% |
| 2oyhA00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 64.0 | 5.89e-01 | 100.0% | 82.8% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 66.0 | 5.98e-01 | 100.0% | 82.5% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.74 | 63.0 | 5.88e-01 | 100.0% | 77.0% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 60.0 | 5.59e-01 | 95.7% | 72.6% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 60.0 | 5.65e-01 | 100.0% | 80.6% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.72 | 60.0 | 4.34e-01 | 100.0% | 31.9% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 57.0 | 5.04e-01 | 93.6% | 71.1% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.72 | 59.0 | 5.63e-01 | 100.0% | 81.0% |
| 4qxbB00 | 6.10.280.250 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 59.0 | 5.18e-01 | 97.9% | 61.8% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 58.0 | 4.51e-01 | 100.0% | 42.4% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 60.0 | 4.60e-01 | 97.9% | 41.3% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 60.0 | 5.49e-01 | 100.0% | 71.9% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.70 | 58.0 | 4.35e-01 | 95.7% | 38.7% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 59.0 | 4.76e-01 | 100.0% | 51.5% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 60.0 | 5.77e-01 | 100.0% | 88.9% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 55.0 | 5.35e-01 | 100.0% | 81.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 59.0 | 5.32e-01 | 100.0% | 72.3% |
| 5tcsA01 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.67 | 47.0 | 3.59e-01 | 85.1% | 32.1% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.67 | 50.0 | 4.18e-01 | 89.4% | 44.6% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 56.0 | 5.43e-01 | 95.7% | 100.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387484 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.83 | 72.0 | 5.95e-01 | 100.0% | 55.3% |
| 3618523 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.82 | 70.0 | 5.70e-01 | 97.9% | 55.6% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.81 | 71.0 | 6.44e-01 | 100.0% | 76.9% |
| 3430567 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.81 | 69.0 | 6.41e-01 | 97.9% | 80.0% |
| 3542203 | 3755.3.1.44 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY | 0.80 | 69.0 | 4.54e-01 | 100.0% | 26.0% |
| 4028290 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.79 | 68.0 | 5.29e-01 | 100.0% | 45.7% |
| 4028999 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.79 | 68.0 | 6.16e-01 | 100.0% | 76.9% |
| 4463205 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.76 | 66.0 | 3.75e-01 | 100.0% | 10.0% |
| 3580316 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.75 | 61.0 | 6.25e-01 | 95.7% | 97.8% |
| 3194777 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.73 | 64.0 | 4.77e-01 | 100.0% | 41.7% |
| 3957419 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.72 | 61.0 | 5.33e-01 | 100.0% | 69.3% |
| 1675309 | 601.51.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N | 0.71 | 60.0 | 4.84e-01 | 100.0% | 70.0% |
| 3394875 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.70 | 58.0 | 3.30e-01 | 97.9% | 8.6% |
| 4961961 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.70 | 57.0 | 5.06e-01 | 100.0% | 61.3% |
| 3491806 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.69 | 55.0 | 3.40e-01 | 100.0% | 22.1% |
| 3969538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 56.0 | 5.43e-01 | 100.0% | 85.5% |
| 1878710 | 4970.1.1.1 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B | 0.67 | 57.0 | 5.46e-01 | 100.0% | 82.1% |
| 4451876 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.67 | 56.0 | 4.12e-01 | 100.0% | 52.1% |
| 4428645 | 3826.1.1.80 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GrpE | 0.65 | 52.0 | 4.90e-01 | 93.6% | 76.7% |
| 3970799 | 602.3.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › TssK neck domain › TssK neck domain | 0.65 | 53.0 | 4.12e-01 | 100.0% | 39.2% |