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NC_019457.1__YP_007003086.1__F353_gp46__00046
Bact-VirNC_019457.1__YP_007003086.1__F353_gp46__00046
Identity
- Accession:
- NC_019457 ↗
- Kingdom:
- phage
Quality
61.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-111
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.54 | 42.0 | 2.90e-01 | 90.3% | 45.5% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.12e-01 | 95.8% | 91.3% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.64e-01 | 83.3% | 84.7% |
| 1wcuA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.50 | 39.0 | 3.22e-01 | 88.9% | 93.3% |
| 8ckpA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.63e-01 | 84.7% | 85.8% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.36e-01 | 77.8% | 95.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588251 | 6043.1.1.3 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N | 0.53 | 38.0 | 3.59e-01 | 88.9% | 61.1% |
| 5068989 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.52 | 28.0 | 3.19e-01 | 88.9% | 68.0% |
| 3520221 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.51 | 31.0 | 2.83e-01 | 83.3% | 41.9% |
| 4001239 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 33.0 | 3.03e-01 | 94.4% | 49.5% |
| 4943610 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.50 | 42.0 | 3.60e-01 | 100.0% | 97.7% |
| 1497987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 3.06e-01 | 97.2% | 90.6% |