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NC_019490.1__YP_007003635.1__F372_gp32__00037
Bact-VirNC_019490.1__YP_007003635.1__F372_gp32__00037
Identity
- Accession:
- NC_019490 ↗
- Kingdom:
- phage
Quality
80.5
mean pLDDT
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-113
Domain cluster:
rep: MW960030.1__QWY82978.1__X__00024__D5-103
D2
medium
residues 119-155_173-196
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 57.0 | 4.67e-01 | 72.1% | 47.1% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 59.0 | 5.09e-01 | 83.6% | 56.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 53.0 | 4.89e-01 | 73.8% | 63.6% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.75 | 51.0 | 3.56e-01 | 70.5% | 66.9% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 50.0 | 5.45e-01 | 70.5% | 98.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 51.0 | 4.70e-01 | 72.1% | 93.6% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.74 | 51.0 | 4.56e-01 | 72.1% | 77.6% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 50.0 | 4.29e-01 | 72.1% | 49.5% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.72 | 64.0 | 5.08e-01 | 98.4% | 76.5% |
| 1ugoA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.71 | 62.0 | 5.29e-01 | 98.4% | 73.7% |
| 1mhyG01 | 1.20.1280.10 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 | 0.70 | 58.0 | 5.60e-01 | 90.2% | 82.4% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 48.0 | 3.92e-01 | 73.8% | 44.6% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 51.0 | 5.16e-01 | 80.3% | 95.1% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.68 | 51.0 | 3.73e-01 | 83.6% | 96.7% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.68 | 60.0 | 5.37e-01 | 98.4% | 81.2% |
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 56.0 | 3.58e-01 | 93.4% | 21.9% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 50.0 | 4.54e-01 | 78.7% | 66.3% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.67 | 55.0 | 4.98e-01 | 93.4% | 80.5% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.67 | 60.0 | 4.59e-01 | 100.0% | 84.9% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 58.0 | 4.43e-01 | 100.0% | 78.5% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 46.0 | 3.08e-01 | 73.8% | 85.8% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.67 | 45.0 | 4.44e-01 | 72.1% | 97.1% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 56.0 | 5.56e-01 | 96.7% | 92.1% |
| 2yjkC00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 58.0 | 4.29e-01 | 98.4% | 83.4% |
| 4a25B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 57.0 | 4.24e-01 | 98.4% | 81.4% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 53.0 | 4.79e-01 | 91.8% | 88.5% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.65 | 52.0 | 5.19e-01 | 90.2% | 86.2% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.65 | 55.0 | 4.95e-01 | 91.8% | 83.1% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.65 | 47.0 | 4.38e-01 | 77.0% | 100.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 56.0 | 4.41e-01 | 96.7% | 66.4% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 57.0 | 4.23e-01 | 100.0% | 84.3% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.65 | 57.0 | 4.28e-01 | 100.0% | 78.4% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 54.0 | 4.28e-01 | 100.0% | 58.3% |
| 2c2jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 55.0 | 4.07e-01 | 98.4% | 80.0% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.64 | 56.0 | 4.27e-01 | 100.0% | 85.6% |
| 1cpcB00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.63 | 53.0 | 3.92e-01 | 96.7% | 75.0% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 53.0 | 4.59e-01 | 100.0% | 90.1% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 51.0 | 4.57e-01 | 98.4% | 78.0% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.61 | 44.0 | 4.31e-01 | 78.7% | 80.6% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.60 | 47.0 | 4.24e-01 | 91.8% | 80.4% |
| 2n04A00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 47.0 | 4.01e-01 | 88.5% | 55.2% |
| 2osaA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.60 | 53.0 | 3.72e-01 | 100.0% | 56.6% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.60 | 44.0 | 4.12e-01 | 78.7% | 84.2% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 49.0 | 3.82e-01 | 98.4% | 88.7% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 43.0 | 3.97e-01 | 78.7% | 84.0% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 49.0 | 3.66e-01 | 95.1% | 76.8% |
| 3teqB00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 3.38e-01 | 72.1% | 91.1% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 41.0 | 4.10e-01 | 78.7% | 84.4% |
| 3w1oA00 | 3.40.1760.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › | 0.57 | 48.0 | 3.90e-01 | 98.4% | 50.4% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 3.83e-01 | 98.4% | 69.9% |
| 2vdwG00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 2.72e-01 | 93.4% | 29.7% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3693906 | 192.22.1.5 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › Tho2 | 0.77 | 59.0 | 5.08e-01 | 82.0% | 64.2% |
| 3944950 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.77 | 54.0 | 5.36e-01 | 73.8% | 83.1% |
| 3385950 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 53.0 | 5.05e-01 | 72.1% | 72.9% |
| 3831865 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.76 | 53.0 | 4.07e-01 | 72.1% | 34.6% |
| 1139567 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.74 | 51.0 | 4.33e-01 | 72.1% | 52.6% |
| 4054043 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.74 | 52.0 | 4.94e-01 | 73.8% | 78.6% |
| 3314530 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.72 | 65.0 | 5.45e-01 | 98.4% | 75.0% |
| 3528346 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 64.0 | 4.65e-01 | 98.4% | 57.6% |
| 3761116 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 64.0 | 4.18e-01 | 98.4% | 34.0% |
| 4169660 | 604.27.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac | 0.72 | 64.0 | 6.12e-01 | 98.4% | 92.9% |
| 3872783 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.72 | 63.0 | 5.33e-01 | 98.4% | 71.0% |
| 3911224 | 604.3.1.34 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG, PF27519 | 0.71 | 63.0 | 4.47e-01 | 98.4% | 43.3% |
| 3271437 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 64.0 | 4.54e-01 | 100.0% | 39.4% |
| 3356077 | 109.4.1.1616 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Trm732_C | 0.71 | 63.0 | 4.06e-01 | 100.0% | 35.0% |
| 3595825 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 65.0 | 3.91e-01 | 100.0% | 27.7% |
| 3409714 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.71 | 62.0 | 5.25e-01 | 98.4% | 73.0% |
| 4237524 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.71 | 48.0 | 4.23e-01 | 70.5% | 56.7% |
| 3526105 | 604.3.1.18 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27519 | 0.70 | 62.0 | 5.43e-01 | 98.4% | 80.0% |
| 3911608 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.70 | 62.0 | 5.42e-01 | 98.4% | 81.1% |
| 3516873 | 159.1.1.3 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › DUF1599 | 0.70 | 55.0 | 5.09e-01 | 86.9% | 86.3% |
| 3479529 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.70 | 61.0 | 5.27e-01 | 98.4% | 76.8% |
| 3768254 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.70 | 60.0 | 5.24e-01 | 98.4% | 77.9% |
| 4927922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 57.0 | 5.82e-01 | 95.1% | 95.0% |
| 3494783 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.69 | 62.0 | 4.64e-01 | 96.7% | 49.3% |
| 4092776 | 604.27.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac | 0.69 | 60.0 | 5.67e-01 | 98.4% | 87.8% |
| 5079385 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.69 | 59.0 | 4.50e-01 | 95.1% | 42.2% |
| 3333417 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.68 | 46.0 | 4.08e-01 | 70.5% | 52.2% |
| 3764851 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.68 | 47.0 | 4.19e-01 | 73.8% | 75.6% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.68 | 55.0 | 4.62e-01 | 93.4% | 57.3% |
| 3245048 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 58.0 | 4.47e-01 | 98.4% | 65.7% |
| 4017640 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 57.0 | 4.81e-01 | 98.4% | 76.9% |
| 3773905 | 604.3.1.33 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 | 0.67 | 59.0 | 5.52e-01 | 96.7% | 84.0% |
| 3848917 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.67 | 47.0 | 4.23e-01 | 73.8% | 80.0% |
| 4344854 | 109.4.1.37 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 | 0.67 | 58.0 | 3.58e-01 | 98.4% | 17.8% |
| 3743175 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.67 | 53.0 | 3.86e-01 | 88.5% | 86.2% |
| 3431415 | 6155.1.1.6 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF2921 | 0.67 | 59.0 | 5.23e-01 | 96.7% | 81.2% |
| 3968401 | 109.4.1.86 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF924 | 0.66 | 60.0 | 4.17e-01 | 100.0% | 35.8% |
| 3508664 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.66 | 53.0 | 4.41e-01 | 91.8% | 60.9% |
| 3750030 | 604.12.1.15 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Mito_morph_reg | 0.66 | 58.0 | 5.13e-01 | 100.0% | 86.7% |
| 3845925 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.66 | 56.0 | 4.57e-01 | 100.0% | 80.0% |
| 3346760 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.65 | 55.0 | 4.39e-01 | 100.0% | 74.8% |
| 4621241 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.65 | 49.0 | 3.38e-01 | 82.0% | 83.3% |
| 4303951 | 601.54.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 | 0.65 | 56.0 | 4.51e-01 | 100.0% | 62.4% |
| 3658236 | 604.12.1.69 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SRP68 | 0.64 | 54.0 | 4.39e-01 | 98.4% | 53.6% |
| 3757569 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 52.0 | 4.20e-01 | 93.4% | 83.1% |
| 4170759 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.64 | 53.0 | 3.28e-01 | 100.0% | 19.8% |
| 3707921 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.64 | 55.0 | 4.55e-01 | 98.4% | 70.0% |
| 3862115 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 52.0 | 4.49e-01 | 98.4% | 85.7% |
| 3594750 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.62 | 56.0 | 3.78e-01 | 100.0% | 47.7% |
| 3193736 | 605.1.1.349 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF28334 | 0.62 | 55.0 | 4.81e-01 | 98.4% | 87.8% |
| 4243249 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.62 | 51.0 | 4.61e-01 | 93.4% | 70.6% |
| 5039732 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 49.0 | 4.13e-01 | 91.8% | 85.0% |
| 3931056 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.62 | 53.0 | 4.49e-01 | 98.4% | 61.9% |
| 3714369 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 3.08e-01 | 100.0% | 28.0% |
| 3589541 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.61 | 53.0 | 3.77e-01 | 100.0% | 31.6% |
| 5013384 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.60 | 44.0 | 3.35e-01 | 78.7% | 42.0% |
| 3264174 | 622.4.1.58 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › PF26756 | 0.60 | 50.0 | 4.70e-01 | 98.4% | 100.0% |
| 3613315 | 1189.1.1.3 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › GARP | 0.60 | 53.0 | 3.71e-01 | 100.0% | 80.5% |
| 4954524 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.59 | 49.0 | 3.52e-01 | 98.4% | 72.2% |
| 3624522 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.56 | 47.0 | 3.37e-01 | 98.4% | 40.0% |
| 4005523 | 3860.1.1.167 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › MscS_porin | 0.55 | 42.0 | 3.22e-01 | 86.9% | 88.1% |
| 3743512 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.55 | 43.0 | 3.25e-01 | 88.5% | 78.2% |
| 4021462 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 39.0 | 2.31e-01 | 80.3% | 9.0% |
D3
medium
residues 213-244
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hjeA03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.68 | 51.0 | 3.90e-01 | 93.8% | 63.7% |
| 1u5eA01 | 6.10.250.220 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 41.0 | 3.58e-01 | 78.1% | 39.6% |
| 3id7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 41.0 | 2.44e-01 | 100.0% | 45.8% |
| 2dk4A00 | 4.10.280.110 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain | 0.52 | 42.0 | 3.23e-01 | 93.8% | 52.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3646516 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.76 | 59.0 | 4.76e-01 | 100.0% | 44.0% |
| 3750061 | 3939.1.1.262 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › PF25977 | 0.57 | 44.0 | 3.57e-01 | 93.8% | 42.7% |