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NC_019516.2__YP_007006012.1__F417_gp021__00021
Bact-VirNC_019516.2__YP_007006012.1__F417_gp021__00021
Identity
- Accession:
- NC_019516 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-63_164-256
Domain cluster:
rep: S2_009_000_R2_scaffold_143_prodigal-single.1__X__X__00197__D14-58_169-280
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q0sA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.80 | 76.0 | 7.33e-01 | 100.0% | 90.4% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.77 | 71.0 | 6.38e-01 | 100.0% | 91.7% |
| 2dpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.77 | 72.0 | 6.83e-01 | 100.0% | 88.4% |
| 1i4wA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.75 | 68.0 | 5.52e-01 | 100.0% | 89.5% |
| 3ieiA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 68.0 | 5.15e-01 | 100.0% | 80.3% |
| 6aieA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 69.0 | 6.14e-01 | 100.0% | 84.6% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 68.0 | 5.94e-01 | 100.0% | 78.9% |
| 1dusA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 68.0 | 5.97e-01 | 100.0% | 76.8% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 63.0 | 4.41e-01 | 92.5% | 96.6% |
| 4gc5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 68.0 | 5.59e-01 | 100.0% | 81.7% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 67.0 | 5.72e-01 | 100.0% | 81.0% |
| 2pjdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 67.0 | 6.04e-01 | 100.0% | 85.3% |
| 1rjgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 66.0 | 5.09e-01 | 100.0% | 72.5% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 66.0 | 6.25e-01 | 100.0% | 95.5% |
| 3v97B04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 66.0 | 5.74e-01 | 100.0% | 83.6% |
| 3g2mA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 66.0 | 6.12e-01 | 100.0% | 95.8% |
| 3futA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 66.0 | 5.74e-01 | 100.0% | 81.4% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 65.0 | 5.92e-01 | 100.0% | 77.4% |
| 2esrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 65.0 | 6.08e-01 | 100.0% | 94.4% |
| 2pgxA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 65.0 | 5.75e-01 | 100.0% | 90.1% |
| 4qttB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 64.0 | 5.83e-01 | 100.0% | 90.9% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 63.0 | 5.97e-01 | 100.0% | 87.2% |
| 3mteA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 58.0 | 4.88e-01 | 90.2% | 86.3% |
| 4rkcA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.68 | 62.0 | 5.08e-01 | 100.0% | 65.3% |
| 3k9gA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 54.0 | 4.57e-01 | 90.2% | 99.1% |
| 3fnbA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 54.0 | 4.41e-01 | 90.2% | 88.8% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.64 | 41.0 | 4.69e-01 | 89.5% | 86.7% |
| 4ac9C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 54.0 | 4.84e-01 | 91.0% | 92.3% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 53.0 | 4.97e-01 | 89.5% | 96.9% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 57.0 | 5.51e-01 | 98.5% | 89.9% |
| 4h0cA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 53.0 | 4.52e-01 | 90.2% | 89.0% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 52.0 | 4.15e-01 | 90.2% | 84.4% |
| 2xitA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 52.0 | 4.15e-01 | 92.5% | 93.5% |
| 2h1iA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 51.0 | 4.43e-01 | 91.0% | 89.2% |
| 2cb0A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 54.0 | 5.17e-01 | 98.5% | 83.6% |
| 3u0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 51.0 | 4.33e-01 | 91.0% | 94.1% |
| 2y0cB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 51.0 | 4.48e-01 | 91.0% | 88.9% |
| 1j5xA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 51.0 | 4.89e-01 | 98.5% | 79.3% |
| 6gt9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 54.0 | 4.96e-01 | 99.2% | 93.1% |
| 3l2oB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 4.53e-01 | 89.5% | 97.7% |
| 3shoA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 53.0 | 4.77e-01 | 97.7% | 72.6% |
| 3etnB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 53.0 | 4.61e-01 | 97.0% | 70.7% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.59 | 36.0 | 4.18e-01 | 88.0% | 86.0% |
| 2a3nA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 53.0 | 4.99e-01 | 98.5% | 81.5% |
| 1f0iA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.58 | 41.0 | 3.54e-01 | 72.9% | 91.1% |
| 1dosA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 50.0 | 3.68e-01 | 94.0% | 55.6% |
| 6ptzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 48.0 | 4.92e-01 | 88.0% | 100.0% |
| 2o3jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 49.0 | 4.26e-01 | 94.0% | 90.0% |
| 1xrsB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.58 | 51.0 | 4.83e-01 | 97.7% | 94.4% |
| 1jeoA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.56 | 50.0 | 4.58e-01 | 97.7% | 75.7% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 45.0 | 4.27e-01 | 89.5% | 99.4% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 3.59e-01 | 76.7% | 99.5% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 46.0 | 4.61e-01 | 89.5% | 94.2% |
| 1in4A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.64e-01 | 94.7% | 88.6% |
| 2r6fA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 50.0 | 4.43e-01 | 100.0% | 90.5% |
| 3bc9A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 3.76e-01 | 97.7% | 88.8% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.54 | 47.0 | 4.36e-01 | 99.2% | 75.8% |
| 1xfdA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 44.0 | 3.60e-01 | 89.5% | 87.3% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 44.0 | 4.45e-01 | 88.0% | 97.7% |
| 1xngA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 46.0 | 3.82e-01 | 96.2% | 83.8% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 47.0 | 3.90e-01 | 100.0% | 86.8% |
| 3lyhA00 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 40.0 | 4.23e-01 | 85.7% | 89.2% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 3.25e-01 | 78.9% | 97.3% |
| 1ig0A01 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.52 | 46.0 | 4.14e-01 | 97.7% | 93.0% |
| 1nf2A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 46.0 | 4.34e-01 | 100.0% | 85.7% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 4.15e-01 | 89.5% | 97.1% |
| 1u04A03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 47.0 | 4.26e-01 | 100.0% | 80.9% |
| 5ly3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 44.0 | 3.86e-01 | 94.7% | 99.0% |
| 3lncA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 3.78e-01 | 90.2% | 77.3% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.67e-01 | 97.7% | 85.2% |
| 5ucdA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 45.0 | 3.80e-01 | 99.2% | 66.4% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4200568 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.88 | 84.0 | 6.39e-01 | 100.0% | 93.1% |
| 4241513 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.87 | 82.0 | 6.18e-01 | 100.0% | 89.8% |
| 4585065 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.87 | 82.0 | 5.12e-01 | 100.0% | 42.4% |
| 9374 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.85 | 81.0 | 6.28e-01 | 100.0% | 95.0% |
| 4546316 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.76 | 71.0 | 5.86e-01 | 100.0% | 88.9% |
| 3396551 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.75 | 68.0 | 5.17e-01 | 100.0% | 58.0% |
| 4948203 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.75 | 69.0 | 5.31e-01 | 100.0% | 71.2% |
| 4428247 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.75 | 68.0 | 5.02e-01 | 100.0% | 78.1% |
| 4426253 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.75 | 68.0 | 5.05e-01 | 100.0% | 75.7% |
| 4974055 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.74 | 68.0 | 4.98e-01 | 100.0% | 77.7% |
| 3693730 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.74 | 68.0 | 5.33e-01 | 100.0% | 68.4% |
| 4975041 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.74 | 68.0 | 5.37e-01 | 100.0% | 75.7% |
| 4422896 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.74 | 69.0 | 6.04e-01 | 100.0% | 81.6% |
| 3262207 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.74 | 67.0 | 5.74e-01 | 100.0% | 87.4% |
| 4980047 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.74 | 67.0 | 5.32e-01 | 100.0% | 75.9% |
| 4953217 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.74 | 67.0 | 5.83e-01 | 100.0% | 81.9% |
| 3290424 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.73 | 66.0 | 5.29e-01 | 100.0% | 77.0% |
| 3432581 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.73 | 66.0 | 4.72e-01 | 100.0% | 70.1% |
| 5047993 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.73 | 66.0 | 5.27e-01 | 100.0% | 87.2% |
| 4243413 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.73 | 66.0 | 5.00e-01 | 100.0% | 78.1% |
| 3252767 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.73 | 66.0 | 5.47e-01 | 100.0% | 80.4% |
| 4445114 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.72 | 66.0 | 5.97e-01 | 100.0% | 82.8% |
| 3820686 | 2003.1.5.32 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 | 0.72 | 66.0 | 4.66e-01 | 100.0% | 40.7% |
| 4084969 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.72 | 67.0 | 6.00e-01 | 100.0% | 83.3% |
| 4020104 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.72 | 66.0 | 4.75e-01 | 100.0% | 53.8% |
| 4346169 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.72 | 66.0 | 5.69e-01 | 100.0% | 74.6% |
| None | — | 0.72 | 66.0 | 5.91e-01 | 100.0% | 82.6% | |
| 4205743 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.72 | 67.0 | 5.86e-01 | 100.0% | 77.4% |
| None | — | 0.72 | 66.0 | 5.77e-01 | 100.0% | 78.5% | |
| None | — | 0.71 | 65.0 | 5.86e-01 | 100.0% | 80.9% | |
| 4277039 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.71 | 65.0 | 5.84e-01 | 100.0% | 79.3% |
| 3969187 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.71 | 64.0 | 5.09e-01 | 99.2% | 75.2% |
| 4051570 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.70 | 65.0 | 5.71e-01 | 100.0% | 78.4% |
| 4955464 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.70 | 63.0 | 5.69e-01 | 100.0% | 89.7% |
| 3271024 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.70 | 63.0 | 5.61e-01 | 100.0% | 80.0% |
| 4024901 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.70 | 42.0 | 5.23e-01 | 92.5% | 95.3% |
| 4431836 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.69 | 63.0 | 5.58e-01 | 100.0% | 74.2% |
| 3463189 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.68 | 61.0 | 4.92e-01 | 100.0% | 56.1% |
| 3695859 | 2005.1.1.38 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 | 0.65 | 52.0 | 4.00e-01 | 88.0% | 86.5% |
| 5048331 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.64 | 54.0 | 4.82e-01 | 93.2% | 64.5% |
| 3279867 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.64 | 39.0 | 4.39e-01 | 100.0% | 80.0% |
| 4133337 | 2003.1.5.84 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DRE2_N | 0.63 | 52.0 | 5.32e-01 | 90.2% | 96.9% |
| 3176787 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.63 | 52.0 | 4.05e-01 | 90.2% | 95.6% |
| 5059861 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.62 | 53.0 | 4.89e-01 | 91.7% | 74.4% |
| None | — | 0.62 | 52.0 | 3.92e-01 | 91.0% | 75.0% | |
| 3836787 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.61 | 51.0 | 5.01e-01 | 90.2% | 95.2% |
| 4501010 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.61 | 54.0 | 4.52e-01 | 97.7% | 90.6% |
| 1107955 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.60 | 51.0 | 4.76e-01 | 98.5% | 73.9% |
| 3329753 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.60 | 54.0 | 4.96e-01 | 100.0% | 78.3% |
| 3652829 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 52.0 | 5.12e-01 | 93.2% | 100.0% |
| 5061634 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.59 | 51.0 | 4.67e-01 | 97.0% | 71.8% |
| 3239127 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.58 | 52.0 | 3.93e-01 | 98.5% | 88.5% |
| 4943213 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.58 | 52.0 | 4.61e-01 | 97.0% | 69.8% |
| 3456739 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 43.0 | 4.13e-01 | 76.7% | 96.0% |
| 5036375 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.58 | 51.0 | 4.82e-01 | 97.0% | 80.0% |
| 5027907 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.57 | 42.0 | 4.47e-01 | 100.0% | 88.7% |
| 4971828 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.57 | 47.0 | 4.70e-01 | 88.7% | 97.9% |
| 3832260 | 7579.1.1.94 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, Peptidase_S15 | 0.57 | 51.0 | 4.05e-01 | 98.5% | 98.5% |
| 3938255 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 46.0 | 3.77e-01 | 85.7% | 59.2% |
| 3731893 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 50.0 | 3.92e-01 | 97.7% | 96.1% |
| 3658629 | 101.1.2.630 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_29 | 0.56 | 44.0 | 4.46e-01 | 97.0% | 83.7% |
| 5001654 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 48.0 | 4.24e-01 | 95.5% | 99.0% |
| 3593046 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 45.0 | 4.39e-01 | 91.0% | 84.0% |
| 3391173 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.54 | 44.0 | 4.22e-01 | 85.7% | 85.3% |
| 3493139 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.54 | 46.0 | 4.75e-01 | 98.5% | 96.0% |
| 4022865 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 45.0 | 3.79e-01 | 92.5% | 75.1% |
| 3733008 | 2484.1.1.114 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C | 0.53 | 45.0 | 3.49e-01 | 94.7% | 66.6% |
| 5039083 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.52 | 40.0 | 4.17e-01 | 91.7% | 87.2% |
| 4669171 | 2484.1.1.114 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C | 0.52 | 44.0 | 3.64e-01 | 94.7% | 76.4% |
| 3716161 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.50 | 44.0 | 3.62e-01 | 100.0% | 97.0% |
| 4940358 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 40.0 | 3.73e-01 | 85.7% | 82.9% |
| 3208574 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 41.0 | 2.86e-01 | 89.5% | 93.8% |
D2
high
residues 64-154
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q0sA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.84 | 77.0 | 7.58e-01 | 100.0% | 92.6% |
| 2g1pA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.81 | 75.0 | 7.31e-01 | 100.0% | 92.0% |
| 2dpmA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.76 | 69.0 | 6.65e-01 | 100.0% | 92.2% |
| 2n04A00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.59 | 45.0 | 4.32e-01 | 91.2% | 70.5% |
| 3sp1A02 | 1.20.120.1910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cysteine-tRNA ligase, C-terminal anti-codon recognition domain | 0.59 | 44.0 | 3.79e-01 | 80.2% | 57.6% |
| 1u6gC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 42.0 | 2.36e-01 | 75.8% | 8.0% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.58 | 41.0 | 4.21e-01 | 73.6% | 79.5% |
| 1elkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 40.0 | 3.42e-01 | 72.5% | 64.7% |
| 3f2bA08 | 1.10.150.870 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 40.0 | 3.51e-01 | 82.4% | 48.9% |
| 3rk6A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 41.0 | 3.15e-01 | 75.8% | 48.4% |
| 6igxD01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 42.0 | 3.07e-01 | 80.2% | 37.4% |
| 2e5vA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.55 | 39.0 | 3.87e-01 | 94.5% | 70.1% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 40.0 | 3.47e-01 | 78.0% | 70.5% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.53 | 42.0 | 3.93e-01 | 86.8% | 83.8% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.79e-01 | 74.7% | 82.4% |
| 2xq2A01 | 1.20.1730.10 | Mainly Alpha › Up-down Bundle › Sodium/glucose cotransporter › Sodium/glucose cotransporter | 0.52 | 44.0 | 2.74e-01 | 94.5% | 42.6% |
| 1x4dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 40.0 | 3.87e-01 | 93.4% | 75.5% |
| 5an3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 38.0 | 3.45e-01 | 79.1% | 86.8% |
| 4v1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 43.0 | 2.93e-01 | 97.8% | 96.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 9374 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.85 | 77.0 | 5.38e-01 | 100.0% | 34.0% |
| 4200568 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.83 | 77.0 | 5.33e-01 | 100.0% | 33.8% |
| 4482107 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.79 | 72.0 | 4.99e-01 | 100.0% | 34.0% |
| 3890535 | 109.4.1.583 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi | 0.63 | 43.0 | 3.26e-01 | 70.3% | 41.3% |
| 3595386 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.62 | 50.0 | 4.17e-01 | 86.8% | 88.4% |
| 3611198 | 109.4.1.1234 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DNAAF5 | 0.58 | 40.0 | 2.83e-01 | 71.4% | 32.4% |
| 4850960 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 52.0 | 4.33e-01 | 100.0% | 73.7% |
| 5043639 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.58 | 42.0 | 2.92e-01 | 76.9% | 91.6% |
| 3502309 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.57 | 40.0 | 2.76e-01 | 72.5% | 27.5% |
| 4494795 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.56 | 44.0 | 3.41e-01 | 85.7% | 92.1% |
| 3767517 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 3.38e-01 | 74.7% | 61.3% |
| 3696590 | 109.4.1.1125 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C | 0.56 | 40.0 | 2.64e-01 | 76.9% | 29.4% |
| 1498138 | 109.2.1.13 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_76 | 0.55 | 43.0 | 2.89e-01 | 82.4% | 83.1% |
| 3643236 | 633.12.1.18 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › PF26751 | 0.52 | 36.0 | 3.35e-01 | 72.5% | 87.5% |
| 3263693 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 42.0 | 3.12e-01 | 87.9% | 43.8% |
| 3631102 | 109.4.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N | 0.52 | 40.0 | 2.86e-01 | 85.7% | 67.3% |
| 4127296 | 109.4.1.1259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 | 0.50 | 39.0 | 2.88e-01 | 84.6% | 81.5% |