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NC_019516.2__YP_007006084.1__F417_gp141__00096
Bact-VirNC_019516.2__YP_007006084.1__F417_gp141__00096
Identity
- Accession:
- NC_019516 ↗
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-160
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hq1A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 53.0 | 5.86e-01 | 95.0% | 98.4% |
| 4fcgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 57.0 | 4.59e-01 | 92.5% | 77.7% |
| 4v2dA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 56.0 | 4.37e-01 | 90.6% | 54.8% |
| 1a9nC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 53.0 | 5.20e-01 | 98.1% | 79.9% |
| 3bz5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 54.0 | 4.03e-01 | 88.7% | 39.7% |
| 4nkhE00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 52.0 | 4.53e-01 | 100.0% | 58.6% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 47.0 | 4.78e-01 | 81.8% | 79.7% |
| 2di7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 32.0 | 3.82e-01 | 85.5% | 79.4% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 46.0 | 4.39e-01 | 84.3% | 83.7% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 28.0 | 3.63e-01 | 76.1% | 83.9% |
| 4nehA04 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.54 | 36.0 | 3.70e-01 | 91.8% | 68.8% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 26.0 | 3.30e-01 | 71.7% | 77.3% |
| 2xdhA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 3.87e-01 | 100.0% | 77.5% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.54 | 27.0 | 3.39e-01 | 89.3% | 78.1% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 38.0 | 3.62e-01 | 74.8% | 89.1% |
| 2zf9A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 3.61e-01 | 92.5% | 67.4% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3312078 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.72 | 53.0 | 4.27e-01 | 93.1% | 42.5% |
| 3314068 | 207.1.1.190 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 | 0.71 | 54.0 | 4.15e-01 | 88.7% | 37.5% |
| 3380214 | 207.1.1.230 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 | 0.70 | 59.0 | 4.39e-01 | 87.4% | 76.5% |
| 3596681 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 59.0 | 4.07e-01 | 88.1% | 37.2% |
| 3995386 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 60.0 | 4.96e-01 | 88.7% | 57.7% |
| 3267742 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.70 | 58.0 | 5.29e-01 | 90.6% | 67.8% |
| 3297339 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.69 | 58.0 | 4.29e-01 | 88.1% | 44.7% |
| 5018050 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 65.0 | 4.95e-01 | 100.0% | 49.0% |
| 3815361 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.69 | 59.0 | 5.16e-01 | 88.7% | 81.8% |
| 3802231 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.69 | 55.0 | 5.11e-01 | 93.1% | 67.7% |
| 3354356 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.69 | 60.0 | 4.53e-01 | 91.2% | 52.9% |
| 3308126 | 207.1.1.289 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › NB-ARC | 0.68 | 57.0 | 3.79e-01 | 88.1% | 28.7% |
| 3374064 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.68 | 59.0 | 3.95e-01 | 91.2% | 32.7% |
| 3323710 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.68 | 57.0 | 4.39e-01 | 88.7% | 50.1% |
| 3333951 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.67 | 57.0 | 4.41e-01 | 88.7% | 52.1% |
| 3819798 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.67 | 57.0 | 4.18e-01 | 88.7% | 47.8% |
| 3653282 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.67 | 59.0 | 4.97e-01 | 91.8% | 87.2% |
| 3348427 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.67 | 57.0 | 4.52e-01 | 88.7% | 54.3% |
| 4463461 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 58.0 | 5.07e-01 | 90.6% | 67.1% |
| 3369011 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.67 | 58.0 | 3.84e-01 | 90.6% | 30.8% |
| 3437236 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 56.0 | 3.61e-01 | 88.1% | 29.6% |
| 3821996 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.67 | 55.0 | 4.25e-01 | 93.7% | 41.8% |
| 3817424 | 207.1.1.174 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 | 0.67 | 56.0 | 3.73e-01 | 88.7% | 27.5% |
| 3320260 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 56.0 | 3.95e-01 | 88.1% | 33.2% |
| 3326658 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.66 | 58.0 | 5.26e-01 | 91.2% | 76.0% |
| 3615230 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 57.0 | 4.73e-01 | 89.3% | 61.2% |
| 3302977 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.66 | 57.0 | 4.34e-01 | 89.3% | 44.2% |
| 3349113 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 56.0 | 4.30e-01 | 88.7% | 46.2% |
| 3437242 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.66 | 56.0 | 5.01e-01 | 89.3% | 68.2% |
| 4025127 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 58.0 | 4.69e-01 | 91.8% | 76.1% |
| 3369154 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.66 | 51.0 | 4.10e-01 | 89.9% | 44.2% |
| 3820991 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.66 | 56.0 | 5.46e-01 | 89.3% | 82.4% |
| 3310662 | 207.1.1.190 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 | 0.66 | 56.0 | 4.74e-01 | 89.3% | 56.8% |
| 3813492 | 207.1.1.296 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8, LRR_RPS2 | 0.66 | 55.0 | 4.26e-01 | 88.7% | 57.5% |
| 3304578 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 56.0 | 3.80e-01 | 88.7% | 46.9% |
| 3321080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 56.0 | 4.25e-01 | 89.3% | 51.0% |
| 3361242 | 207.1.1.100 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 | 0.65 | 55.0 | 4.80e-01 | 89.3% | 60.4% |
| 3308398 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.65 | 55.0 | 4.95e-01 | 89.3% | 66.2% |
| 3309124 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.65 | 57.0 | 5.03e-01 | 91.2% | 73.2% |
| 3804197 | 207.1.1.238 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 | 0.65 | 55.0 | 3.77e-01 | 88.7% | 30.0% |
| 3677583 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.65 | 54.0 | 4.91e-01 | 89.3% | 66.2% |
| 3367224 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.65 | 55.0 | 4.69e-01 | 89.3% | 70.8% |
| 3298276 | 207.1.1.174 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 | 0.65 | 55.0 | 3.98e-01 | 88.7% | 56.1% |
| 3605461 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.65 | 55.0 | 4.10e-01 | 88.7% | 46.8% |
| 3814227 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.64 | 55.0 | 5.14e-01 | 91.8% | 73.3% |
| 3346094 | 5.1.5.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N | 0.64 | 54.0 | 3.57e-01 | 89.3% | 27.6% |
| 3458151 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.64 | 57.0 | 4.97e-01 | 93.7% | 77.0% |
| 3299931 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 54.0 | 4.43e-01 | 87.4% | 62.2% |
| None | — | 0.64 | 54.0 | 5.46e-01 | 92.5% | 89.4% | |
| 3272941 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.64 | 55.0 | 3.67e-01 | 91.2% | 25.4% |
| 3305778 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.63 | 55.0 | 4.18e-01 | 91.8% | 46.3% |
| 3322644 | 207.1.1.100 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 | 0.63 | 55.0 | 4.15e-01 | 91.8% | 43.7% |
| 3793222 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.63 | 54.0 | 4.51e-01 | 90.6% | 55.1% |
| None | — | 0.63 | 55.0 | 3.41e-01 | 91.8% | 18.8% | |
| 3876966 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.62 | 54.0 | 3.51e-01 | 91.2% | 33.1% |
| 3417460 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.61 | 52.0 | 3.92e-01 | 91.2% | 43.6% |
| 3816687 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 52.0 | 3.77e-01 | 90.6% | 43.0% |
| 3952750 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.60 | 32.0 | 3.92e-01 | 75.5% | 80.0% |
| 3275074 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 50.0 | 5.16e-01 | 88.1% | 92.0% |
| 3611259 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 51.0 | 5.16e-01 | 100.0% | 91.0% |
| 3335984 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.60 | 56.0 | 4.22e-01 | 100.0% | 68.5% |
| 3329845 | 207.1.1.190 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 | 0.58 | 51.0 | 5.06e-01 | 93.7% | 91.8% |