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NC_019516.2__YP_007006117.1__F417_gp108__00129
Bact-VirNC_019516.2__YP_007006117.1__F417_gp108__00129
Identity
- Accession:
- NC_019516 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-86
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04542.21 best | Sigma70_r2 | 24.9 | 2.00e-05 | 79.8% | 78.9% |
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.88 | 82.0 | 8.20e-01 | 100.0% | 100.0% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.88 | 80.0 | 5.98e-01 | 100.0% | 42.6% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.87 | 82.0 | 7.97e-01 | 100.0% | 94.1% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.87 | 78.0 | 5.12e-01 | 98.7% | 25.2% |
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 75.0 | 7.02e-01 | 97.5% | 79.2% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.82 | 70.0 | 4.58e-01 | 93.7% | 97.2% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 67.0 | 5.49e-01 | 100.0% | 92.2% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.70 | 58.0 | 5.55e-01 | 92.4% | 94.5% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.70 | 58.0 | 5.57e-01 | 93.7% | 85.7% |
| 4nleA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.69 | 47.0 | 4.86e-01 | 83.5% | 73.7% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.67 | 55.0 | 5.32e-01 | 91.1% | 83.0% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 39.0 | 4.17e-01 | 84.8% | 69.7% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.65 | 55.0 | 4.05e-01 | 100.0% | 62.9% |
| 3urrA00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.65 | 52.0 | 4.16e-01 | 86.1% | 58.6% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.65 | 50.0 | 5.36e-01 | 91.1% | 100.0% |
| 6fakA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.64 | 52.0 | 4.95e-01 | 91.1% | 74.7% |
| 1s7bA00 | 1.10.3730.20 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.62 | 51.0 | 4.66e-01 | 89.9% | 67.9% |
| 3f7cA00 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.61 | 44.0 | 3.36e-01 | 77.2% | 54.8% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.61 | 46.0 | 4.54e-01 | 83.5% | 75.6% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 36.0 | 3.60e-01 | 84.8% | 56.8% |
| 1wpwA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.59 | 48.0 | 3.24e-01 | 92.4% | 83.9% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.58 | 46.0 | 4.59e-01 | 88.6% | 93.9% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 45.0 | 4.31e-01 | 87.3% | 77.1% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.58 | 41.0 | 4.11e-01 | 88.6% | 74.1% |
| 6qumA04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.57 | 48.0 | 3.96e-01 | 96.2% | 52.3% |
| 6umqA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.57 | 45.0 | 4.06e-01 | 89.9% | 98.3% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 4.38e-01 | 87.3% | 96.6% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.56 | 47.0 | 3.73e-01 | 93.7% | 51.2% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.56 | 47.0 | 3.87e-01 | 98.7% | 87.3% |
| 3himA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 48.0 | 3.66e-01 | 100.0% | 88.9% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 39.0 | 3.41e-01 | 75.9% | 71.9% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 44.0 | 4.34e-01 | 91.1% | 93.1% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 39.0 | 3.78e-01 | 79.7% | 69.0% |
| 2raeA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.80e-01 | 96.2% | 56.2% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 47.0 | 3.57e-01 | 100.0% | 87.2% |
| 3i44A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 45.0 | 3.13e-01 | 97.5% | 58.9% |
| 3rh9A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 42.0 | 2.84e-01 | 86.1% | 54.3% |
| 1o9jC01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 41.0 | 2.78e-01 | 86.1% | 51.3% |
| 2bk9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 3.40e-01 | 89.9% | 92.8% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 44.0 | 3.78e-01 | 97.5% | 64.4% |
| 1z5zA02 | 1.20.120.850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain | 0.51 | 36.0 | 3.64e-01 | 89.9% | 76.3% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 44.0 | 3.49e-01 | 100.0% | 83.4% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 45.0 | 3.68e-01 | 97.5% | 92.4% |
| 4f3xA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.86e-01 | 89.9% | 68.2% |
| 4pdyA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.51 | 42.0 | 3.07e-01 | 93.7% | 54.5% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 38.0 | 3.76e-01 | 84.8% | 78.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278088 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.90 | 80.0 | 7.02e-01 | 96.2% | 68.2% |
| 3360961 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.88 | 82.0 | 6.18e-01 | 100.0% | 45.1% |
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 81.0 | 5.82e-01 | 98.7% | 39.5% |
| 3971939 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 79.0 | 7.69e-01 | 96.2% | 91.8% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 80.0 | 5.48e-01 | 100.0% | 30.7% |
| 4570076 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 81.0 | 5.35e-01 | 98.7% | 29.3% |
| 4349095 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.88 | 78.0 | 6.77e-01 | 94.9% | 67.8% |
| 4258677 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 80.0 | 5.64e-01 | 98.7% | 36.0% |
| 4624390 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.88 | 80.0 | 6.91e-01 | 97.5% | 70.4% |
| None | — | 0.88 | 80.0 | 5.66e-01 | 98.7% | 36.8% | |
| None | — | 0.87 | 78.0 | 5.38e-01 | 100.0% | 31.4% | |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.86 | 79.0 | 6.16e-01 | 100.0% | 49.4% |
| 3972284 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.86 | 79.0 | 6.82e-01 | 97.5% | 69.6% |
| 4876272 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.86 | 79.0 | 7.31e-01 | 98.7% | 88.7% |
| 3090120 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.86 | 78.0 | 6.76e-01 | 98.7% | 69.5% |
| 4274766 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.86 | 77.0 | 6.96e-01 | 98.7% | 73.3% |
| 4452096 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.86 | 79.0 | 5.77e-01 | 100.0% | 40.5% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 78.0 | 5.36e-01 | 98.7% | 35.5% |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 78.0 | 5.08e-01 | 100.0% | 25.1% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 78.0 | 5.36e-01 | 98.7% | 57.1% |
| 3828850 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.82 | 74.0 | 5.89e-01 | 97.5% | 80.0% |
| None | — | 0.81 | 74.0 | 5.73e-01 | 100.0% | 49.1% | |
| 3676572 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 74.0 | 5.60e-01 | 98.7% | 70.9% |
| 3960310 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 66.0 | 6.99e-01 | 94.9% | 100.0% |
| 3339567 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 73.0 | 5.54e-01 | 100.0% | 45.0% |
| 4495452 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.78 | 68.0 | 6.09e-01 | 98.7% | 69.1% |
| 3967660 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.78 | 68.0 | 6.36e-01 | 100.0% | 78.9% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.76 | 67.0 | 5.12e-01 | 98.7% | 45.6% |
| 3190824 | 166.1.1.0 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C | 0.72 | 61.0 | 6.26e-01 | 93.7% | 100.0% |
| 4275108 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.72 | 56.0 | 5.63e-01 | 86.1% | 90.0% |
| 4080250 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.68 | 51.0 | 3.22e-01 | 81.0% | 17.5% |
| 4048619 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.68 | 55.0 | 4.61e-01 | 89.9% | 73.6% |
| 4164998 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.68 | 55.0 | 5.16e-01 | 91.1% | 75.0% |
| 3702398 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.64 | 51.0 | 3.76e-01 | 89.9% | 82.2% |
| 354272 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.61 | 39.0 | 3.71e-01 | 98.7% | 53.1% |
| 5057376 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.60 | 42.0 | 4.15e-01 | 73.4% | 96.5% |
| 4988203 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.60 | 49.0 | 3.57e-01 | 91.1% | 78.6% |
| 5027309 | 160.1.1.4 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_VA_C | 0.57 | 49.0 | 4.05e-01 | 100.0% | 56.0% |
| 3171096 | 5054.1.1.12 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › NCA2 | 0.56 | 43.0 | 3.37e-01 | 82.3% | 53.5% |
| 4645242 | 191.1.1.26 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 | 0.55 | 46.0 | 3.86e-01 | 94.9% | 93.8% |
| 3956601 | 191.1.1.17 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13 | 0.55 | 48.0 | 4.53e-01 | 100.0% | 91.6% |
| 5014266 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 43.0 | 4.40e-01 | 93.7% | 94.7% |
| 4994573 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.52 | 42.0 | 4.20e-01 | 93.7% | 87.5% |
| 3865887 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.51 | 38.0 | 3.76e-01 | 81.0% | 84.7% |
| 4976283 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 39.0 | 3.53e-01 | 86.1% | 91.3% |
| 4981740 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.50 | 35.0 | 3.81e-01 | 84.8% | 90.8% |
| 4192675 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.50 | 43.0 | 4.09e-01 | 96.2% | 85.3% |
| 3785508 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.50 | 38.0 | 3.93e-01 | 81.0% | 86.7% |
| 3235853 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.50 | 42.0 | 4.21e-01 | 94.9% | 98.8% |
D2
high
residues 93-138
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13412.13 best | HTH_24 | 22.0 | 1.30e-04 | 69.6% | 56.2% |
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 81.0 | 7.28e-01 | 97.8% | 73.8% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 71.0 | 7.54e-01 | 87.0% | 100.0% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 72.0 | 7.05e-01 | 89.1% | 82.0% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 77.0 | 6.86e-01 | 95.7% | 68.8% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 78.0 | 7.42e-01 | 100.0% | 83.3% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 6.70e-01 | 95.7% | 68.3% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 74.0 | 7.13e-01 | 93.5% | 84.6% |
| 7s03A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 60.0 | 6.75e-01 | 71.7% | 100.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 77.0 | 6.89e-01 | 100.0% | 71.4% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 77.0 | 7.02e-01 | 100.0% | 74.2% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 69.0 | 7.00e-01 | 87.0% | 100.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 74.0 | 7.03e-01 | 95.7% | 80.0% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 72.0 | 6.53e-01 | 93.5% | 68.3% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 72.0 | 6.31e-01 | 95.7% | 62.7% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 77.0 | 6.64e-01 | 100.0% | 67.1% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 68.0 | 6.41e-01 | 91.3% | 71.4% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 76.0 | 6.50e-01 | 100.0% | 65.8% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 71.0 | 6.16e-01 | 95.7% | 60.0% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 69.0 | 5.93e-01 | 91.3% | 63.0% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 73.0 | 7.12e-01 | 100.0% | 90.0% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 74.0 | 6.36e-01 | 100.0% | 65.3% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 71.0 | 6.57e-01 | 95.7% | 76.3% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 70.0 | 6.25e-01 | 93.5% | 68.8% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 73.0 | 5.59e-01 | 100.0% | 46.2% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 64.0 | 5.93e-01 | 89.1% | 67.2% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 5.79e-01 | 95.7% | 58.3% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 5.95e-01 | 97.8% | 63.6% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 72.0 | 5.56e-01 | 100.0% | 47.0% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 70.0 | 6.29e-01 | 100.0% | 70.3% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 68.0 | 6.25e-01 | 100.0% | 72.6% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 69.0 | 6.17e-01 | 100.0% | 71.6% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 70.0 | 5.78e-01 | 100.0% | 54.8% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.81 | 66.0 | 6.24e-01 | 100.0% | 76.8% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.80 | 65.0 | 4.20e-01 | 95.7% | 20.4% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.79 | 65.0 | 5.11e-01 | 95.7% | 44.3% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 65.0 | 5.94e-01 | 95.7% | 70.5% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 66.0 | 6.05e-01 | 97.8% | 75.4% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 65.0 | 6.45e-01 | 100.0% | 89.6% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 5.75e-01 | 95.7% | 67.2% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.48e-01 | 100.0% | 55.3% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 59.0 | 5.63e-01 | 93.5% | 72.2% |
| 3lsgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 60.0 | 5.78e-01 | 91.3% | 83.6% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 65.0 | 4.77e-01 | 100.0% | 35.7% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 5.57e-01 | 100.0% | 65.3% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.63e-01 | 100.0% | 66.7% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 59.0 | 5.88e-01 | 89.1% | 100.0% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 65.0 | 4.04e-01 | 100.0% | 19.1% |
| 3mkzN00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.75 | 66.0 | 4.99e-01 | 100.0% | 41.8% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.52e-01 | 95.7% | 66.2% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 65.0 | 5.31e-01 | 100.0% | 68.6% |
| 2ibdA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 58.0 | 5.85e-01 | 89.1% | 93.3% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.75 | 67.0 | 5.24e-01 | 100.0% | 53.2% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 5.29e-01 | 97.8% | 68.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 65.0 | 5.02e-01 | 100.0% | 51.5% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 5.42e-01 | 97.8% | 64.8% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 59.0 | 5.03e-01 | 93.5% | 52.5% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 63.0 | 5.41e-01 | 100.0% | 61.8% |
| 1zybA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.73 | 63.0 | 4.07e-01 | 100.0% | 23.3% |
| 3lmmC04 | 1.10.10.2340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 60.0 | 5.01e-01 | 100.0% | 54.0% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 5.16e-01 | 100.0% | 67.9% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.26e-01 | 97.8% | 63.9% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 5.28e-01 | 95.7% | 70.0% |
| 2raeA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 54.0 | 5.55e-01 | 89.1% | 100.0% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 59.0 | 5.18e-01 | 100.0% | 67.1% |
| 5k7fA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 53.0 | 5.53e-01 | 87.0% | 100.0% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.20e-01 | 100.0% | 72.0% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 54.0 | 4.66e-01 | 93.5% | 52.6% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 52.0 | 5.20e-01 | 87.0% | 91.7% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 5.24e-01 | 100.0% | 77.6% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 4.95e-01 | 100.0% | 72.6% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 4.80e-01 | 100.0% | 63.5% |
| 1rktA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 51.0 | 4.98e-01 | 89.1% | 83.0% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 54.0 | 4.59e-01 | 97.8% | 67.1% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 51.0 | 4.55e-01 | 87.0% | 61.5% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060508 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.94 | 76.0 | 8.10e-01 | 87.0% | 100.0% |
| 4969884 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.93 | 80.0 | 7.27e-01 | 93.5% | 71.7% |
| 5019015 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.92 | 75.0 | 8.03e-01 | 89.1% | 100.0% |
| 4984317 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.92 | 82.0 | 7.64e-01 | 95.7% | 80.0% |
| 5048567 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.91 | 77.0 | 6.81e-01 | 93.5% | 67.7% |
| 4985650 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.91 | 77.0 | 6.46e-01 | 93.5% | 58.7% |
| 4978382 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.90 | 76.0 | 7.18e-01 | 93.5% | 80.0% |
| 5040079 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.90 | 79.0 | 6.58e-01 | 95.7% | 60.0% |
| 4982834 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 77.0 | 6.36e-01 | 95.7% | 56.2% |
| 5078072 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.89 | 80.0 | 7.03e-01 | 100.0% | 69.2% |
| 5077990 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.89 | 80.0 | 6.24e-01 | 100.0% | 50.0% |
| 5082771 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 77.0 | 6.36e-01 | 95.7% | 55.0% |
| 4192837 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.89 | 73.0 | 6.92e-01 | 91.3% | 76.4% |
| 3924432 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 78.0 | 7.12e-01 | 97.8% | 75.0% |
| 3934282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 78.0 | 7.61e-01 | 97.8% | 90.0% |
| 4947593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 76.0 | 7.18e-01 | 95.7% | 81.8% |
| 4970108 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.88 | 77.0 | 7.50e-01 | 97.8% | 92.0% |
| 5030496 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.88 | 78.0 | 7.07e-01 | 100.0% | 75.0% |
| 3592957 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 72.0 | 7.00e-01 | 89.1% | 82.0% |
| 4318089 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.87 | 71.0 | 6.49e-01 | 89.1% | 68.3% |
| 4449179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 71.0 | 6.48e-01 | 89.1% | 68.3% |
| 5077607 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 76.0 | 6.98e-01 | 100.0% | 75.0% |
| 3940612 | 101.1.1.61 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AsnC-type | 0.87 | 77.0 | 7.04e-01 | 97.8% | 75.0% |
| 4984666 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.87 | 79.0 | 6.61e-01 | 100.0% | 61.3% |
| 4040211 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.87 | 71.0 | 6.46e-01 | 89.1% | 68.3% |
| 5058496 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.87 | 76.0 | 6.56e-01 | 100.0% | 64.3% |
| 4610234 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.87 | 70.0 | 6.45e-01 | 89.1% | 68.3% |
| 4956290 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.86 | 75.0 | 6.71e-01 | 100.0% | 69.2% |
| 5044109 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.86 | 75.0 | 6.51e-01 | 100.0% | 64.3% |
| 5044655 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.86 | 71.0 | 6.98e-01 | 93.5% | 86.0% |
| 3280565 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 7.23e-01 | 95.7% | 94.0% |
| 4978144 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.86 | 71.0 | 6.56e-01 | 93.5% | 73.3% |
| 4928836 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.86 | 74.0 | 6.46e-01 | 100.0% | 64.3% |
| 3923654 | 101.1.1.356 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 | 0.85 | 75.0 | 6.79e-01 | 95.7% | 75.0% |
| 5061099 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.85 | 71.0 | 6.53e-01 | 93.5% | 71.7% |
| 3952144 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.85 | 74.0 | 6.59e-01 | 100.0% | 69.2% |
| 4961695 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.85 | 76.0 | 6.42e-01 | 100.0% | 61.3% |
| 5068861 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.85 | 75.0 | 5.71e-01 | 100.0% | 44.8% |
| 5031372 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 72.0 | 6.82e-01 | 95.7% | 80.0% |
| 5032601 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.85 | 74.0 | 7.03e-01 | 100.0% | 85.5% |
| 4948474 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 75.0 | 6.50e-01 | 100.0% | 67.1% |
| 1764926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 70.0 | 6.93e-01 | 95.7% | 89.6% |
| 3957509 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.84 | 74.0 | 6.80e-01 | 100.0% | 76.7% |
| 1769338 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 70.0 | 6.06e-01 | 95.7% | 61.4% |
| 4979789 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.83 | 71.0 | 6.71e-01 | 97.8% | 80.0% |
| 5034428 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.83 | 68.0 | 6.66e-01 | 91.3% | 84.0% |
| 4957813 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.83 | 71.0 | 6.35e-01 | 97.8% | 67.7% |
| 3495994 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.83 | 72.0 | 6.66e-01 | 100.0% | 78.3% |
| 2886105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 68.0 | 6.70e-01 | 93.5% | 85.7% |
| 4961224 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.82 | 71.0 | 6.22e-01 | 97.8% | 64.3% |
| 3988327 | 101.1.1.118 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 | 0.82 | 72.0 | 6.76e-01 | 97.8% | 81.8% |
| 3929674 | 101.1.1.195 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 | 0.82 | 69.0 | 6.76e-01 | 93.5% | 86.0% |
| 5051760 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.82 | 72.0 | 6.45e-01 | 100.0% | 70.8% |
| 3937070 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 68.0 | 6.51e-01 | 95.7% | 80.0% |
| 3931679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 71.0 | 6.89e-01 | 95.7% | 88.0% |
| 3933478 | 101.1.1.197 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › IF2_N | 0.81 | 68.0 | 6.06e-01 | 95.7% | 66.2% |
| 3924290 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.77e-01 | 93.5% | 95.6% |
| 5030083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 70.0 | 6.83e-01 | 97.8% | 90.0% |
| 3937842 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 5.35e-01 | 95.7% | 46.3% |
| 4973758 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.81 | 70.0 | 6.34e-01 | 100.0% | 73.4% |
| 5082754 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 68.0 | 6.26e-01 | 100.0% | 73.3% |
| 4224164 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.80 | 69.0 | 5.80e-01 | 100.0% | 57.5% |
| 3937075 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.80 | 67.0 | 6.32e-01 | 95.7% | 78.2% |
| 3928067 | 101.1.1.356 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_11 | 0.80 | 66.0 | 6.30e-01 | 95.7% | 78.2% |
| 4977346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 67.0 | 6.53e-01 | 93.5% | 88.0% |
| 4979948 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 6.27e-01 | 95.7% | 80.0% |
| 3509611 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 67.0 | 6.37e-01 | 95.7% | 83.6% |
| 4980944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 65.0 | 5.50e-01 | 95.7% | 55.0% |
| 3932648 | 101.1.1.195 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 | 0.79 | 69.0 | 6.56e-01 | 100.0% | 83.6% |
| 4928849 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 6.37e-01 | 100.0% | 76.7% |
| 5046294 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.77 | 66.0 | 6.25e-01 | 100.0% | 81.8% |
| 5030830 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 67.0 | 5.83e-01 | 97.8% | 67.1% |
| 3404575 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.77 | 65.0 | 5.30e-01 | 97.8% | 50.0% |
| 5027753 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 66.0 | 6.72e-01 | 97.8% | 100.0% |
| 5034431 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.73 | 61.0 | 4.44e-01 | 100.0% | 32.9% |
| 3397887 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.73 | 59.0 | 5.29e-01 | 95.7% | 67.1% |
| 3964709 | 101.1.1.118 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 | 0.73 | 61.0 | 5.95e-01 | 95.7% | 86.0% |
| 5029842 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.73 | 60.0 | 4.76e-01 | 100.0% | 44.8% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.72 | 62.0 | 6.06e-01 | 100.0% | 90.0% |
| 4989426 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.71 | 60.0 | 5.59e-01 | 97.8% | 83.3% |
| 5013822 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 5.88e-01 | 97.8% | 92.5% |
| 4026960 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 59.0 | 5.17e-01 | 100.0% | 64.0% |
D3
high
residues 161-222
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 6.13e-01 | 95.2% | 90.5% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.62e-01 | 96.8% | 75.0% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 6.01e-01 | 100.0% | 98.4% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 60.0 | 5.95e-01 | 98.4% | 96.9% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.67 | 58.0 | 4.49e-01 | 100.0% | 49.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 5.17e-01 | 91.9% | 87.7% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 47.0 | 3.96e-01 | 82.3% | 59.3% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.63 | 40.0 | 4.15e-01 | 71.0% | 71.4% |
| 2vxzA02 | 1.10.10.1490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 43.0 | 3.93e-01 | 74.2% | 74.7% |
| 3m8jA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 48.0 | 4.31e-01 | 87.1% | 61.1% |
| 4r30A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 43.0 | 3.16e-01 | 75.8% | 40.8% |
| 8d8lN01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 45.0 | 4.06e-01 | 100.0% | 59.3% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 42.0 | 3.54e-01 | 83.9% | 44.9% |
| 3b4uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 42.0 | 2.78e-01 | 80.6% | 25.8% |
| 2j3vA02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.57 | 47.0 | 3.39e-01 | 100.0% | 33.0% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.56 | 40.0 | 3.37e-01 | 83.9% | 43.1% |
| 3mzvA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 46.0 | 3.05e-01 | 98.4% | 96.1% |
| 1q1hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 3.82e-01 | 82.3% | 65.9% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 37.0 | 3.53e-01 | 91.9% | 57.3% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 43.0 | 3.16e-01 | 100.0% | 29.8% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 42.0 | 4.14e-01 | 85.5% | 92.8% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 39.0 | 3.35e-01 | 83.9% | 46.1% |
| 6g85A01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 39.0 | 3.03e-01 | 75.8% | 64.8% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 44.0 | 3.50e-01 | 91.9% | 70.7% |
| 3nwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 48.0 | 3.10e-01 | 100.0% | 38.1% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 40.0 | 2.99e-01 | 77.4% | 63.3% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.55 | 37.0 | 3.64e-01 | 98.4% | 65.2% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 40.0 | 3.01e-01 | 82.3% | 80.4% |
| 3fm9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 43.0 | 4.02e-01 | 90.3% | 85.9% |
| 7ncyB01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 36.0 | 2.95e-01 | 72.6% | 38.8% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.52 | 38.0 | 3.13e-01 | 90.3% | 42.9% |
| 4f03B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 37.0 | 2.86e-01 | 79.0% | 33.1% |
| 1mtzA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 2.80e-01 | 100.0% | 39.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4148347 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.79 | 62.0 | 5.22e-01 | 91.9% | 51.0% |
| None | — | 0.77 | 61.0 | 5.07e-01 | 91.9% | 49.5% | |
| 3589532 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 60.0 | 5.22e-01 | 91.9% | 56.1% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.75 | 64.0 | 4.26e-01 | 98.4% | 23.6% |
| None | — | 0.75 | 59.0 | 4.98e-01 | 91.9% | 51.4% | |
| 3971665 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 65.0 | 6.14e-01 | 100.0% | 84.0% |
| 4388780 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.74 | 63.0 | 4.83e-01 | 98.4% | 41.4% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 4.20e-01 | 100.0% | 24.4% |
| 3961841 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.73 | 61.0 | 5.93e-01 | 98.4% | 84.3% |
| 4121566 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.73 | 56.0 | 5.04e-01 | 91.9% | 58.9% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.50e-01 | 100.0% | 70.6% |
| 4279016 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.72 | 62.0 | 5.71e-01 | 100.0% | 75.0% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.72 | 62.0 | 4.72e-01 | 100.0% | 40.7% |
| 4585396 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.72 | 62.0 | 4.64e-01 | 98.4% | 38.7% |
| 4570076 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.72 | 62.0 | 4.04e-01 | 98.4% | 22.1% |
| 3163616 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.72 | 63.0 | 5.53e-01 | 100.0% | 70.2% |
| 3972282 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 62.0 | 5.76e-01 | 98.4% | 78.5% |
| 4563221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.72 | 62.0 | 5.40e-01 | 98.4% | 65.3% |
| 4304581 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.71 | 56.0 | 4.95e-01 | 91.9% | 57.4% |
| 4303963 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.71 | 58.0 | 5.50e-01 | 96.8% | 76.0% |
| 4470607 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.71 | 56.0 | 4.59e-01 | 91.9% | 47.0% |
| 4037682 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.71 | 56.0 | 4.81e-01 | 91.9% | 54.0% |
| 3964397 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.71 | 61.0 | 5.21e-01 | 100.0% | 60.0% |
| 3279339 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 54.0 | 3.93e-01 | 90.3% | 28.6% |
| 3969325 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.71 | 61.0 | 5.94e-01 | 100.0% | 90.0% |
| 4674817 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.70 | 59.0 | 4.31e-01 | 96.8% | 35.4% |
| 4530655 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.70 | 54.0 | 4.65e-01 | 90.3% | 53.0% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.70 | 59.0 | 5.86e-01 | 98.4% | 90.8% |
| 4112812 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.70 | 60.0 | 5.12e-01 | 100.0% | 62.9% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.69 | 56.0 | 3.80e-01 | 96.8% | 23.3% |
| 3288090 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.69 | 57.0 | 5.58e-01 | 98.4% | 84.3% |
| None | — | 0.69 | 56.0 | 3.80e-01 | 96.8% | 23.3% | |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.69 | 59.0 | 5.76e-01 | 100.0% | 87.1% |
| 5041617 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 57.0 | 5.07e-01 | 91.9% | 64.4% |
| 3282225 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.69 | 57.0 | 5.34e-01 | 98.4% | 75.0% |
| 3951829 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.68 | 58.0 | 5.33e-01 | 98.4% | 74.1% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 58.0 | 5.47e-01 | 100.0% | 80.0% |
| 3971149 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 58.0 | 5.42e-01 | 100.0% | 75.0% |
| 4577850 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.68 | 58.0 | 5.03e-01 | 98.4% | 61.6% |
| 3973709 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 59.0 | 5.03e-01 | 100.0% | 61.0% |
| 4289285 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 54.0 | 4.85e-01 | 91.9% | 62.2% |
| 4205790 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 56.0 | 5.24e-01 | 96.8% | 73.8% |
| 4439853 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.68 | 54.0 | 5.28e-01 | 96.8% | 81.4% |
| 3974118 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 57.0 | 5.15e-01 | 98.4% | 67.8% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.67 | 57.0 | 3.93e-01 | 100.0% | 26.2% |
| 4456068 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.67 | 56.0 | 4.95e-01 | 100.0% | 63.0% |
| 3284011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.66 | 57.0 | 5.55e-01 | 100.0% | 90.0% |
| 4336182 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 52.0 | 4.68e-01 | 91.9% | 62.2% |
| 3959929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.65 | 54.0 | 5.06e-01 | 96.8% | 75.0% |
| 5054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 56.0 | 5.02e-01 | 100.0% | 97.8% |
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.64 | 54.0 | 5.03e-01 | 98.4% | 75.0% |
| 4174698 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 54.0 | 4.29e-01 | 96.8% | 89.2% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.63 | 54.0 | 4.68e-01 | 100.0% | 72.0% |
| 3578154 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 52.0 | 4.67e-01 | 100.0% | 73.3% |
| 4987475 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 44.0 | 4.38e-01 | 82.3% | 80.0% |
| 3989722 | 632.24.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor C-terminal domain › GBS CAMP factor C-terminal domain | 0.59 | 42.0 | 4.20e-01 | 98.4% | 72.3% |
| 4016062 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.56 | 44.0 | 4.00e-01 | 100.0% | 63.5% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.55 | 41.0 | 3.90e-01 | 90.3% | 66.7% |
| 3814458 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.53 | 36.0 | 3.46e-01 | 75.8% | 60.0% |
| 4351705 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.52 | 41.0 | 3.76e-01 | 90.3% | 65.0% |