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NC_019516.2__YP_007006138.1__F417_gp087__00150

Bact-Vir

NC_019516.2__YP_007006138.1__F417_gp087__00150

Identity

Accession:
NC_019516 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aurunvirus› Cyanophage_S-TIM5

TaxID: 1137745

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-146
PDB
Domain cluster: rep: NC_030941.1__YP_009276507.1__BH767_gp48__00048__D58-156
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.69 48.0 4.92e-01 71.6% 73.7%
6bl6B01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 48.0 3.47e-01 95.7% 89.9%
7sgrA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 48.0 3.54e-01 99.1% 94.2%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 48.0 3.68e-01 94.0% 77.6%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 41.0 4.07e-01 94.0% 77.5%
3qavA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 45.0 4.25e-01 98.3% 82.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3903422 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.68 49.0 4.85e-01 74.1% 95.8%
3754265 603.1.1.187 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DNA_repr_REX1B 0.63 45.0 5.10e-01 94.8% 95.6%
4028066 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.57 53.0 4.64e-01 100.0% 94.5%
3470779 3755.3.1.420 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PTHB1_hp 0.54 47.0 3.86e-01 96.6% 83.3%
3923555 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 47.0 4.51e-01 99.1% 83.8%
3484074 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.50 47.0 4.42e-01 100.0% 85.7%