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NC_019516.2__YP_007006144.1__F417_gp079__00158

Bact-Vir

NC_019516.2__YP_007006144.1__F417_gp079__00158

Identity

Accession:
NC_019516 ↗
Kingdom:
phage

Quality

71.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aurunvirus› Cyanophage_S-TIM5

TaxID: 1137745

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-92
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.76 51.0 4.28e-01 70.0% 55.1%
1r8oB01 2.30.30.480 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 4.42e-01 75.0% 71.2%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.73 54.0 4.05e-01 80.0% 56.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 4.25e-01 75.0% 81.0%
3eafA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 55.0 3.61e-01 95.0% 25.4%
1ej6B00 3.90.1830.10 Alpha Beta › Alpha-Beta Complex › Inner capsid protein lambda-1 › Inner capsid protein lambda-1 0.67 49.0 2.60e-01 80.0% 5.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 49.0 4.47e-01 82.5% 85.7%
3o46A00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.66 46.0 3.66e-01 75.0% 53.6%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 52.0 3.14e-01 95.0% 21.6%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.65 46.0 3.57e-01 80.0% 83.5%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 47.0 2.78e-01 85.0% 23.6%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 45.0 3.47e-01 77.5% 95.9%
3o8eB01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.64 50.0 4.34e-01 82.5% 85.5%
1gsoA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.64 44.0 3.08e-01 75.0% 70.5%
3k8rA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.63 43.0 3.77e-01 77.5% 44.1%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.63 51.0 4.08e-01 97.5% 45.6%
3mqgA02 2.20.70.110 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.63 45.0 4.61e-01 82.5% 100.0%
1yu0A01 2.10.10.30 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.62 52.0 4.91e-01 100.0% 78.4%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.62 50.0 4.41e-01 97.5% 76.6%
4tvcA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.61 48.0 3.20e-01 95.0% 26.1%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.61 52.0 2.97e-01 97.5% 15.2%
3nkdA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.61 42.0 3.43e-01 75.0% 33.3%
8cjvA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.61 46.0 4.21e-01 77.5% 77.4%
4ipuA00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.61 42.0 3.09e-01 80.0% 56.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 3.84e-01 75.0% 85.5%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 46.0 3.10e-01 95.0% 45.0%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 46.0 3.15e-01 95.0% 47.8%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 42.0 3.55e-01 77.5% 81.4%
2uuvB01 3.40.462.40 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix 0.59 42.0 2.59e-01 77.5% 40.8%
6muwB00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 47.0 3.07e-01 100.0% 39.7%
5e6zC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 3.21e-01 80.0% 67.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.58 41.0 3.35e-01 80.0% 50.6%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.58 42.0 2.75e-01 87.5% 16.8%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.58 41.0 3.22e-01 80.0% 34.0%
1e6vC00 3.90.320.20 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › Methyl-coenzyme M reductase, gamma subunit 0.57 40.0 2.48e-01 70.0% 12.9%
4geqB00 3.30.160.430 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 3.79e-01 80.0% 56.9%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.57 45.0 2.67e-01 92.5% 23.5%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 44.0 3.63e-01 87.5% 67.5%
7szeB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 41.0 3.39e-01 97.5% 85.0%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 43.0 3.61e-01 82.5% 84.9%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 40.0 2.62e-01 80.0% 15.3%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.56 46.0 3.31e-01 100.0% 70.3%
1r75A00 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 44.0 3.32e-01 90.0% 80.0%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 44.0 3.89e-01 95.0% 74.6%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 40.0 2.83e-01 77.5% 71.9%
6y48D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 39.0 2.42e-01 80.0% 38.6%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 46.0 3.61e-01 92.5% 53.8%
1kfwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 39.0 3.47e-01 77.5% 82.5%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 43.0 3.34e-01 95.0% 50.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 2.89e-01 75.0% 28.7%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.63e-01 100.0% 23.4%
2j8gA02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.54 41.0 3.56e-01 100.0% 64.6%
2v05A02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.54 43.0 2.99e-01 100.0% 37.9%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 39.0 2.79e-01 80.0% 36.9%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.54 37.0 2.93e-01 80.0% 37.3%
4fl4F02 2.60.40.4130 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 2.65e-01 77.5% 26.8%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 43.0 3.62e-01 95.0% 82.4%
2ww8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.01e-01 85.0% 39.6%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 38.0 3.19e-01 82.5% 43.6%
4bc3A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 37.0 2.50e-01 87.5% 98.6%
2pf5D00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 39.0 3.21e-01 100.0% 47.9%
3h37A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 36.0 2.60e-01 80.0% 22.8%
4pt4B00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.51 39.0 3.20e-01 100.0% 59.8%
3floB00 1.10.3200.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger 0.51 35.0 2.29e-01 70.0% 75.0%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3498702 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.78 62.0 6.02e-01 95.0% 80.0%
3185909 394.1.1.2 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 0.76 54.0 5.05e-01 75.0% 60.0%
3528795 3761.1.1.0 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.74 57.0 5.54e-01 97.5% 77.8%
4002724 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.73 50.0 2.87e-01 70.0% 7.6%
3935301 391.1.2.11 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.72 53.0 4.89e-01 87.5% 60.0%
3702974 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.72 49.0 4.53e-01 75.0% 53.7%
5071089 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 55.0 5.20e-01 87.5% 76.0%
3335386 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.71 51.0 2.92e-01 77.5% 53.8%
4017465 928.1.1.0 ↗ few secondary structure elements › Bubble protein › Bubble protein › Bubble protein 0.71 51.0 4.84e-01 80.0% 63.3%
3942382 64.3.1.0 ↗ beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.70 53.0 4.31e-01 82.5% 66.7%
5069323 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 58.0 5.44e-01 95.0% 96.0%
4951967 246.2.1.19 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PGA_cap 0.70 57.0 3.44e-01 95.0% 89.3%
2581368 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.70 52.0 5.31e-01 95.0% 89.7%
3755669 391.1.1.5 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa 0.69 50.0 5.10e-01 95.0% 80.0%
4499078 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.69 55.0 4.69e-01 100.0% 52.9%
3272167 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 50.0 2.95e-01 77.5% 11.9%
None — 0.69 50.0 3.05e-01 80.0% 38.5%
3476114 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.69 50.0 2.88e-01 80.0% 17.5%
3982481 64.3.1.0 ↗ beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.68 61.0 5.16e-01 97.5% 76.9%
3538117 391.1.2.17 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC, VWC2L_2nd 0.68 56.0 3.99e-01 100.0% 30.4%
3988987 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.68 54.0 4.23e-01 97.5% 66.0%
3271846 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.68 51.0 4.72e-01 87.5% 80.0%
3965255 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.67 53.0 3.88e-01 87.5% 33.6%
1826876 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.67 53.0 3.41e-01 97.5% 28.8%
4436120 2002.1.1.121 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.67 46.0 2.72e-01 80.0% 8.8%
4561895 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.67 47.0 3.02e-01 80.0% 14.8%
3987255 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.66 54.0 3.39e-01 100.0% 27.3%
4578847 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.66 54.0 3.21e-01 100.0% 18.6%
4968925 375.1.1.356 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29210 0.66 48.0 4.87e-01 80.0% 95.0%
3979842 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.66 47.0 4.33e-01 77.5% 85.5%
5055783 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.66 45.0 3.50e-01 70.0% 30.0%
2883161 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.64 51.0 3.54e-01 97.5% 42.1%
5056777 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 42.0 3.38e-01 70.0% 32.5%
3988985 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.64 52.0 4.06e-01 100.0% 58.0%
5061340 11.1.1.237 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.64 44.0 3.79e-01 75.0% 51.4%
2453130 702.1.1.4 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.64 48.0 3.05e-01 90.0% 19.3%
4998113 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.63 44.0 4.31e-01 80.0% 66.7%
3683580 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.63 45.0 2.79e-01 80.0% 38.5%
4526481 7575.1.1.2 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.63 44.0 2.93e-01 77.5% 31.1%
5024805 4.2.1.3 ↗ beta barrels › SH3 › SAND › SAND › RAMA 0.63 48.0 3.92e-01 87.5% 46.3%
3343842 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.63 45.0 2.61e-01 80.0% 47.6%
4819490 702.1.1.3 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.62 49.0 3.45e-01 100.0% 44.4%
4679970 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.62 44.0 3.39e-01 80.0% 91.4%
3968342 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.62 42.0 3.97e-01 72.5% 86.8%
3842985 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.62 48.0 3.04e-01 87.5% 65.0%
3844043 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.62 44.0 3.85e-01 75.0% 88.3%
3276003 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.62 43.0 2.75e-01 75.0% 44.5%
4661064 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.61 42.0 3.80e-01 75.0% 84.7%
3777158 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.61 47.0 2.73e-01 85.0% 79.4%
3682832 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.61 47.0 3.30e-01 92.5% 59.4%
5041236 375.13.1.1 ↗ few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.60 40.0 3.77e-01 70.0% 85.5%
3968312 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.60 48.0 3.72e-01 100.0% 93.5%
3634232 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 41.0 2.38e-01 72.5% 45.2%
3605675 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 49.0 2.83e-01 100.0% 21.6%
3927335 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.60 48.0 2.93e-01 97.5% 46.7%
4354137 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.60 47.0 3.05e-01 95.0% 41.6%
3930845 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 40.0 3.38e-01 70.0% 45.7%
5002278 2484.1.1.71 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter 0.59 48.0 2.93e-01 95.0% 27.7%
5070897 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.58 41.0 3.46e-01 75.0% 45.3%
3953651 4317.1.1.1 ↗ a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 0.58 38.0 3.40e-01 75.0% 42.9%
1824581 316.1.1.1 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.58 44.0 3.17e-01 100.0% 83.9%
4955506 2003.1.5.444 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1156 0.57 39.0 2.24e-01 72.5% 17.2%
3197450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 3.57e-01 100.0% 42.0%
3786120 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 38.0 3.66e-01 70.0% 64.0%
3480592 252.1.1.0 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.57 41.0 3.71e-01 77.5% 96.7%
4195918 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 47.0 2.94e-01 97.5% 27.8%
3740511 2.1.1.89 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.57 39.0 3.16e-01 80.0% 33.3%
4290367 2498.1.1.40 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M66 0.57 41.0 2.57e-01 85.0% 100.0%
3176860 2007.1.19.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin 0.57 46.0 2.72e-01 100.0% 20.8%
5077602 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.57 45.0 2.79e-01 92.5% 61.9%
3177048 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.57 39.0 3.11e-01 75.0% 35.8%
3928729 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.56 45.0 2.96e-01 97.5% 40.7%
3465398 3939.1.1.208 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › APG6 0.56 38.0 2.39e-01 87.5% 10.2%
3718059 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 44.0 3.69e-01 87.5% 64.3%
5032782 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.56 40.0 3.25e-01 90.0% 36.7%
3607772 376.1.4.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog 0.55 43.0 3.50e-01 87.5% 56.2%
3971397 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.54 38.0 3.11e-01 80.0% 55.9%
5041142 5.1.4.181 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR 0.53 46.0 2.55e-01 100.0% 85.4%
4157389 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.51 35.0 3.14e-01 75.0% 44.6%
D2 high residues 147-315
PDB
Domain cluster: rep: KJ019159.1__AIX45734.1__Syn7803C34_183__00183__D420-558
D3 medium residues 426-551
PDB