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NC_019516.2__YP_007006163.1__F417_gp060__00177
Bact-VirNC_019516.2__YP_007006163.1__F417_gp060__00177
Identity
- Accession:
- NC_019516 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-126
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19847.5 best | DUF6322 | 50.9 | 2.20e-13 | 100.0% | 43.2% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztbA03 | 2.60.40.3040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 31.0 | 3.54e-01 | 100.0% | 64.6% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.57 | 34.0 | 3.88e-01 | 81.5% | 86.4% |
| 2z4tA01 | 2.60.40.3010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.47e-01 | 100.0% | 50.0% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.54 | 30.0 | 2.89e-01 | 76.9% | 43.0% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.53 | 33.0 | 3.29e-01 | 84.6% | 57.7% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 34.0 | 2.78e-01 | 95.4% | 35.0% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.52 | 40.0 | 2.45e-01 | 86.2% | 31.6% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 32.0 | 3.36e-01 | 80.0% | 70.7% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.23e-01 | 100.0% | 54.8% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.50 | 40.0 | 3.33e-01 | 100.0% | 48.4% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 3.67e-01 | 95.4% | 76.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968534 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 49.0 | 4.54e-01 | 100.0% | 62.4% |
| 3791839 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.63 | 32.0 | 3.04e-01 | 73.8% | 40.0% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.62 | 32.0 | 3.50e-01 | 73.8% | 58.2% |
| 3230771 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.62 | 32.0 | 2.90e-01 | 73.8% | 35.6% |
| 3622643 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.62 | 32.0 | 2.96e-01 | 73.8% | 37.6% |
| 4992408 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 34.0 | 3.93e-01 | 100.0% | 82.2% |
| 3589823 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 33.0 | 3.34e-01 | 80.0% | 53.8% |
| 3941356 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 31.0 | 2.62e-01 | 78.5% | 29.2% |
| 3927945 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 38.0 | 3.18e-01 | 76.9% | 96.5% |
| 2831850 | 4135.1.1.1 ↗ | beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like › CXXC_Zn-b_euk | 0.52 | 43.0 | 3.29e-01 | 96.9% | 96.5% |
| 3407700 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.51 | 44.0 | 3.36e-01 | 100.0% | 91.3% |
| 3612754 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.50 | 39.0 | 3.31e-01 | 98.5% | 48.3% |
| 3253503 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.50 | 37.0 | 3.35e-01 | 100.0% | 55.8% |
| 4955093 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.20e-01 | 100.0% | 50.5% |