NC_019516.2__YP_010419861.1__F417_gp104__00133

Bact-Vir

Identity

58.0 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Aurunvirus› Cyanophage_S-TIM5

TaxID: 1137745

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-103

PDB

Domain cluster: rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00132__D29-77_93-127

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04717.19 best	Phage_base_V	36.8	5.80e-09	98.6%	94.7%

D2 medium residues 116-186_201-233

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3h4rA00	3.90.320.10	Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A ›	0.59	45.0	3.56e-01	82.7%	81.3%
3d2lA02	2.20.25.110	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases	0.57	31.0	3.77e-01	79.8%	85.7%
1y8cA02	2.20.25.110	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases	0.55	29.0	3.52e-01	80.8%	83.3%
3d7rA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.50	43.0	3.25e-01	100.0%	62.2%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3480379	214.1.1.1 ↗	a+b two layers › SH2 › SH2 › SH2 › SH2	0.58	39.0	3.92e-01	81.7%	68.6%
3397916	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.54	46.0	2.76e-01	100.0%	20.3%
3232669	214.1.1.0 ↗	a+b two layers › SH2 › SH2 › SH2	0.53	35.0	3.47e-01	82.7%	62.7%
3476114	2484.1.1.1 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70	0.52	36.0	2.44e-01	71.2%	54.3%
3689727	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.52	43.0	2.94e-01	93.3%	35.1%
3179689	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.51	43.0	3.29e-01	96.2%	67.7%
4198183	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.50	38.0	2.42e-01	79.8%	64.6%

D3 medium residues 234-319

PDB