NC_019518.1__YP_007006406.1__F397_gp17__00017

Bact-Vir

Identity

83.9 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_VchM-138

TaxID: 1127518

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-66

PDB

Domain cluster: rep: MG696115.1__AUM58640.1__phiP47_012__00012__D3-62

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gicD02	1.10.3610.10	Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein	0.62	36.0	2.55e-01	100.0%	18.5%
4ijjB00	1.20.120.910	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain	0.61	53.0	4.18e-01	96.8%	52.3%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4621809	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.61	39.0	2.55e-01	93.7%	14.8%
3597386	376.1.1.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box	0.59	52.0	4.33e-01	95.2%	85.7%
3259236	376.1.1.20 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX	0.54	47.0	4.02e-01	96.8%	87.0%
3637145	376.1.1.21 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2	0.53	39.0	3.48e-01	77.8%	61.1%
3994088	376.1.1.23 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2	0.52	43.0	3.55e-01	98.4%	98.5%
3218020	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.52	39.0	3.76e-01	92.1%	68.0%