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NC_019526.1__YP_007007535.1__F403_gp155__00380

Bact-Vir

NC_019526.1__YP_007007535.1__F403_gp155__00380

Identity

Accession:
NC_019526 ↗
Kingdom:
phage

Quality

63.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alcyoneusvirus› Klebsiella_phage_vB_KleM_RaK2

TaxID: 1147094

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-60
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xb1A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.77 56.0 4.72e-01 76.7% 62.5%
3lcvB01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.68 51.0 5.23e-01 81.7% 100.0%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 49.0 4.47e-01 88.3% 77.1%
1zp2A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 45.0 3.71e-01 80.0% 54.8%
2fnaA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 49.0 4.62e-01 95.0% 73.7%
2zcmA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 47.0 3.44e-01 86.7% 40.9%
3bg3A04 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 41.0 4.47e-01 86.7% 100.0%
2qgnA02 1.10.287.890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.54 37.0 3.44e-01 73.3% 78.0%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 38.0 3.70e-01 76.7% 68.7%
2nxpB00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.51 36.0 2.82e-01 75.0% 86.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033799 4230.1.1.3 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.60 41.0 4.37e-01 73.3% 96.0%
3608299 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.55 38.0 3.46e-01 91.7% 53.8%
D2 high residues 71-173
PDB