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NC_019527.1__YP_007007708.1__F394_gp19__00019
Bact-VirNC_019527.1__YP_007007708.1__F394_gp19__00019
Identity
- Accession:
- NC_019527 ↗
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Taxonomy
TaxID: 1127514
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-113
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.71 | 34.0 | 4.63e-01 | 90.3% | 86.9% |
| 6jgwA01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.64 | 43.0 | 4.20e-01 | 98.2% | 62.8% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.61 | 30.0 | 2.69e-01 | 85.8% | 32.7% |
| 1v4gA01 | 6.10.140.800 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 24.0 | 2.93e-01 | 75.2% | 56.5% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.57 | 47.0 | 3.34e-01 | 94.7% | 31.4% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 45.0 | 4.39e-01 | 92.0% | 78.6% |
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.52 | 23.0 | 2.60e-01 | 72.6% | 49.4% |
| 1e40A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 37.0 | 2.63e-01 | 78.8% | 47.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4115372 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.74 | 38.0 | 3.88e-01 | 97.3% | 51.8% |
| 4034237 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.69 | 36.0 | 3.61e-01 | 71.7% | 49.6% |
| 3207548 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 46.0 | 4.29e-01 | 93.8% | 57.1% |
| 3635348 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 35.0 | 3.08e-01 | 94.7% | 34.5% |
| 5039404 | 604.2.1.0 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0.64 | 25.0 | 3.02e-01 | 79.6% | 52.0% |
| 3706007 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.61 | 37.0 | 3.12e-01 | 84.1% | 37.3% |
| 4029765 | 3755.1.1.15 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › RIFIN | 0.61 | 52.0 | 4.30e-01 | 93.8% | 52.5% |
| 3630322 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.60 | 40.0 | 2.60e-01 | 98.2% | 15.0% |
| 3688913 | 1002.1.1.3 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › ThrE | 0.60 | 32.0 | 2.90e-01 | 87.6% | 39.3% |
| 3676126 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.57 | 40.0 | 3.33e-01 | 94.7% | 40.5% |
| 3922119 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.57 | 48.0 | 3.43e-01 | 91.2% | 86.2% |
| 4498509 | 3755.4.1.86 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF445 | 0.54 | 42.0 | 4.12e-01 | 100.0% | 75.2% |
| 4874836 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.54 | 31.0 | 3.30e-01 | 84.1% | 63.6% |
| 4873383 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.53 | 48.0 | 3.29e-01 | 100.0% | 75.9% |
| 4169661 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.52 | 43.0 | 3.57e-01 | 96.5% | 51.0% |
| 4524404 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.52 | 40.0 | 3.54e-01 | 82.3% | 57.5% |
| 3600217 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 37.0 | 2.88e-01 | 89.4% | 34.4% |