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NC_019545.1__YP_007010987.1__F482_gp17__00017
Bact-VirNC_019545.1__YP_007010987.1__F482_gp17__00017
Identity
- Accession:
- NC_019545 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-32_49-116
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.71 | 42.0 | 4.88e-01 | 94.8% | 83.6% |
| 1fu0A00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.69 | 45.0 | 4.73e-01 | 94.8% | 73.6% |
| 1jelP00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.69 | 45.0 | 4.74e-01 | 94.8% | 75.3% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 50.0 | 5.15e-01 | 94.8% | 79.6% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 44.0 | 4.74e-01 | 94.8% | 76.8% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 47.0 | 5.35e-01 | 94.8% | 98.6% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 45.0 | 4.72e-01 | 93.8% | 76.5% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 49.0 | 5.06e-01 | 93.8% | 83.1% |
| 2q5wD00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.66 | 47.0 | 5.20e-01 | 99.0% | 93.5% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.65 | 41.0 | 4.47e-01 | 93.8% | 78.2% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 4.93e-01 | 93.8% | 80.8% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 56.0 | 5.66e-01 | 100.0% | 96.9% |
| 1wj4A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 46.0 | 4.84e-01 | 100.0% | 89.2% |
| 3qc8B00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 44.0 | 4.73e-01 | 100.0% | 92.5% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 50.0 | 4.17e-01 | 92.7% | 72.7% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 51.0 | 4.81e-01 | 94.8% | 98.3% |
| 3goeA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 42.0 | 4.48e-01 | 100.0% | 88.7% |
| 3jyuA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 44.0 | 4.59e-01 | 100.0% | 87.8% |
| 1v6eA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 44.0 | 4.67e-01 | 100.0% | 97.5% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 44.0 | 4.78e-01 | 93.8% | 98.8% |
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 37.0 | 4.22e-01 | 90.6% | 96.9% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.53e-01 | 94.8% | 87.8% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 48.0 | 3.25e-01 | 94.8% | 81.2% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.57 | 40.0 | 4.09e-01 | 100.0% | 75.0% |
| 6kbyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 47.0 | 3.26e-01 | 94.8% | 76.2% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 49.0 | 4.53e-01 | 95.8% | 86.8% |
| 2f7aA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 44.0 | 4.08e-01 | 84.4% | 90.1% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 46.0 | 4.17e-01 | 93.8% | 95.6% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 38.0 | 3.90e-01 | 94.8% | 72.3% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 41.0 | 4.40e-01 | 100.0% | 97.5% |
| 2lxaA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 40.0 | 4.17e-01 | 100.0% | 87.4% |
| 3w1sC00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 38.0 | 4.15e-01 | 100.0% | 93.4% |
| 5ggiB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 45.0 | 3.46e-01 | 94.8% | 83.0% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 41.0 | 4.34e-01 | 86.5% | 96.4% |
| 2v1yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 41.0 | 4.29e-01 | 100.0% | 93.3% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 4.41e-01 | 100.0% | 93.6% |
| 2ja9A02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 39.0 | 4.10e-01 | 87.5% | 94.0% |
| 1vz8A02 | 3.10.20.340 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › ArgJ beta chain, C-terminal domain | 0.50 | 44.0 | 4.20e-01 | 100.0% | 84.8% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965231 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.74 | 47.0 | 5.40e-01 | 94.8% | 88.6% |
| 3288140 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.73 | 62.0 | 5.78e-01 | 93.8% | 99.2% |
| 4977215 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.71 | 44.0 | 5.26e-01 | 93.8% | 98.3% |
| 4950693 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 47.0 | 5.01e-01 | 93.8% | 77.6% |
| 4679908 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 46.0 | 5.10e-01 | 100.0% | 94.7% |
| 3626313 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 51.0 | 5.34e-01 | 100.0% | 95.3% |
| 4041337 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.62 | 51.0 | 5.26e-01 | 100.0% | 93.3% |
| 3391781 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.61 | 47.0 | 4.87e-01 | 100.0% | 88.9% |
| 3937933 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.61 | 43.0 | 4.64e-01 | 100.0% | 90.0% |
| 4334558 | 221.1.1.178 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Sde2_N_Ubi_yeast | 0.61 | 45.0 | 4.86e-01 | 100.0% | 93.8% |
| 3995601 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.61 | 44.0 | 4.70e-01 | 100.0% | 91.3% |
| 3716865 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 45.0 | 4.86e-01 | 100.0% | 95.0% |
| 3491355 | 221.1.1.70 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › OTU1_UBXL | 0.60 | 45.0 | 4.88e-01 | 100.0% | 96.2% |
| 5000514 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.60 | 49.0 | 5.13e-01 | 94.8% | 97.7% |
| 3914871 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.60 | 43.0 | 4.07e-01 | 100.0% | 61.7% |
| 4243425 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 42.0 | 4.65e-01 | 100.0% | 97.3% |
| 3625245 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 42.0 | 4.61e-01 | 100.0% | 96.0% |
| 4125261 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 49.0 | 4.95e-01 | 100.0% | 93.7% |
| 3915455 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.58 | 42.0 | 4.59e-01 | 100.0% | 98.7% |
| 3534747 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.58 | 43.0 | 3.43e-01 | 100.0% | 38.5% |
| 3249989 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.58 | 44.0 | 3.89e-01 | 100.0% | 54.5% |
| 3699556 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.58 | 44.0 | 4.27e-01 | 100.0% | 74.3% |
| 3926652 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 4.52e-01 | 100.0% | 85.3% |
| 5063669 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 41.0 | 4.58e-01 | 85.4% | 98.7% |
| 3483645 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.57 | 43.0 | 4.59e-01 | 99.0% | 96.2% |
| 3184727 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.57 | 42.0 | 4.51e-01 | 100.0% | 96.2% |
| 3406156 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.55 | 45.0 | 4.28e-01 | 91.7% | 81.7% |
| 2130835 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.55 | 39.0 | 4.15e-01 | 96.9% | 88.6% |
| 3845291 | 220.1.1.119 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th | 0.55 | 38.0 | 2.85e-01 | 70.8% | 88.9% |
| 3991511 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.55 | 44.0 | 4.50e-01 | 88.5% | 100.0% |
| 3470199 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.54 | 41.0 | 4.20e-01 | 100.0% | 86.7% |
| 3459406 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.53 | 44.0 | 4.34e-01 | 92.7% | 100.0% |
| 4943116 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 41.0 | 4.39e-01 | 86.5% | 97.6% |
| 3785313 | 221.1.1.95 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Dsc3_N | 0.53 | 45.0 | 4.53e-01 | 100.0% | 92.0% |
| 3707943 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.53 | 42.0 | 4.02e-01 | 100.0% | 75.5% |
| 3927796 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.52 | 44.0 | 3.24e-01 | 94.8% | 42.3% |
| 4134001 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.52 | 43.0 | 3.30e-01 | 91.7% | 85.7% |
| 3414412 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.52 | 43.0 | 4.20e-01 | 92.7% | 86.7% |
| 3708462 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 46.0 | 3.60e-01 | 100.0% | 48.1% |
| 5026869 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 40.0 | 4.22e-01 | 86.5% | 95.3% |
| 3741061 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.94e-01 | 100.0% | 75.5% |
| 3738248 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.51 | 35.0 | 3.90e-01 | 81.2% | 92.0% |
| 3512577 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.51 | 42.0 | 4.23e-01 | 100.0% | 91.6% |
| 5012954 | 632.2.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF515 | 0.51 | 44.0 | 3.98e-01 | 100.0% | 73.6% |