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NC_019719.1__YP_007112340.1__F848_gp64__00064

Bact-Vir

NC_019719.1__YP_007112340.1__F848_gp64__00064

Identity

Accession:
NC_019719 ↗
Kingdom:
phage

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-55
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04383.20 best KilA-N 30.3 4.50e-07 100.0% 46.7%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 44.0 2.96e-01 92.2% 47.4%
4pyrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 38.0 2.60e-01 70.6% 75.8%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.55 37.0 3.38e-01 72.5% 68.0%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.54 43.0 2.86e-01 94.1% 50.8%
1ji8A01 3.30.1420.10 Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain 0.51 35.0 3.63e-01 92.2% 78.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281823 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.57 40.0 2.93e-01 76.5% 69.3%
3407824 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.51 41.0 3.41e-01 94.1% 93.0%
3824608 235.1.1.2 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 0.51 42.0 2.71e-01 98.0% 23.6%