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NC_019912.1__YP_007236384.1__ISGA_26__00026
Bact-VirNC_019912.1__YP_007236384.1__ISGA_26__00026
Identity
- Accession:
- NC_019912 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 2884431
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.64 | 45.0 | 4.74e-01 | 78.3% | 98.1% |
| 4csrA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.63 | 39.0 | 3.45e-01 | 80.0% | 40.9% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 42.0 | 3.60e-01 | 70.0% | 95.9% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 31.0 | 2.59e-01 | 71.7% | 31.6% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 45.0 | 4.23e-01 | 86.7% | 98.7% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 43.0 | 3.91e-01 | 81.7% | 98.8% |
| 2bg1A01 | 3.90.1310.40 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › | 0.56 | 41.0 | 3.87e-01 | 81.7% | 84.4% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.56 | 40.0 | 2.86e-01 | 76.7% | 42.1% |
| 2f3nA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 37.0 | 3.69e-01 | 91.7% | 69.2% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.54 | 40.0 | 3.67e-01 | 85.0% | 66.7% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.10e-01 | 96.7% | 31.0% |
| 4gczA03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.51 | 34.0 | 3.30e-01 | 71.7% | 63.1% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 33.0 | 3.13e-01 | 80.0% | 53.4% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.50 | 33.0 | 3.45e-01 | 86.7% | 75.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969424 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.71 | 37.0 | 3.41e-01 | 71.7% | 40.0% |
| 3598252 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.69 | 51.0 | 5.39e-01 | 80.0% | 100.0% |
| 3339637 | 148.1.1.68 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PLAC8 | 0.66 | 41.0 | 3.72e-01 | 88.3% | 47.5% |
| 3893243 | 190.1.1.9 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_WDHD1 | 0.63 | 46.0 | 4.72e-01 | 80.0% | 100.0% |
| 3736557 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.59 | 49.0 | 4.58e-01 | 100.0% | 85.0% |
| 5040482 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.57 | 42.0 | 3.31e-01 | 81.7% | 49.3% |
| 1095885 | 6128.1.1.0 ↗ | 0.57 | 32.0 | 3.18e-01 | 76.7% | 49.2% | |
| 3989860 | 191.1.1.12 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_8 | 0.55 | 38.0 | 3.20e-01 | 88.3% | 43.0% |
| 3643488 | 192.15.1.11 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CemA | 0.55 | 38.0 | 3.54e-01 | 86.7% | 56.0% |
| 3495550 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 43.0 | 3.62e-01 | 100.0% | 50.5% |
| 154974 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.52 | 35.0 | 3.18e-01 | 78.3% | 53.2% |
| 3953479 | 601.1.1.136 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › EccD | 0.52 | 43.0 | 2.78e-01 | 96.7% | 22.8% |
| 4352871 | 601.7.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C | 0.51 | 40.0 | 2.35e-01 | 91.7% | 59.6% |
| 3580853 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 32.0 | 3.21e-01 | 86.7% | 60.0% |