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NC_019912.1__YP_007236392.1__ISGA_34__00034

Bact-Vir

NC_019912.1__YP_007236392.1__ISGA_34__00034

Identity

Accession:
NC_019912 ↗
Kingdom:
phage

Quality

69.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-91
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xfoA02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 39.0 3.58e-01 78.6% 66.1%
2kzyA00 1.20.5.4770 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 35.0 3.27e-01 97.6% 54.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3592231 377.9.1.0 few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.66 53.0 5.44e-01 88.1% 92.5%
3370105 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.59 42.0 3.80e-01 78.6% 90.0%
3239464 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.56 46.0 3.41e-01 100.0% 58.1%
3509877 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 40.0 4.07e-01 97.6% 90.0%