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NC_019912.1__YP_007236396.1__ISGA_38__00038

Bact-Vir

NC_019912.1__YP_007236396.1__ISGA_38__00038

Identity

Accession:
NC_019912 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lwoffvirus› Bacillus_phage_vB_BtS_BMBtp2

TaxID: 2884431

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-85
PDB
Domain cluster: rep: OQ504960.1__WID41994.1__X__00022__D3-68
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 5.81e-01 92.2% 98.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.74 44.0 5.31e-01 92.2% 92.0%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.73 48.0 4.19e-01 97.4% 44.8%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.79e-01 94.8% 100.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 42.0 4.06e-01 88.3% 52.9%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.70 52.0 4.84e-01 100.0% 63.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.12e-01 93.5% 77.9%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 51.0 4.69e-01 100.0% 63.3%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.67 45.0 3.63e-01 100.0% 38.1%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 41.0 4.07e-01 97.4% 60.0%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.65 52.0 4.62e-01 100.0% 60.6%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 45.0 4.13e-01 100.0% 56.1%
1tdqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 40.0 3.83e-01 100.0% 52.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 51.0 4.46e-01 100.0% 58.0%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.63 39.0 4.50e-01 98.7% 90.6%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.62 47.0 4.12e-01 100.0% 54.3%
1lwuC01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.62 43.0 3.39e-01 100.0% 36.4%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.61 55.0 4.49e-01 100.0% 95.7%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 43.0 3.42e-01 100.0% 35.8%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 37.0 3.08e-01 98.7% 32.6%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.61 47.0 4.01e-01 100.0% 52.5%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 41.0 3.73e-01 100.0% 50.0%
3bgyA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.60 53.0 3.83e-01 100.0% 49.1%
3ijfX00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 43.0 3.63e-01 97.4% 47.2%
6czfA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 40.0 2.67e-01 100.0% 16.8%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 53.0 4.56e-01 98.7% 66.9%
5u81A01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.59 42.0 2.93e-01 75.3% 94.6%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 43.0 3.43e-01 98.7% 37.7%
6j0qA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.59 43.0 3.84e-01 98.7% 54.1%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.59 38.0 3.53e-01 100.0% 50.5%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.59 38.0 3.98e-01 97.4% 75.8%
1r5tA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.59 43.0 3.47e-01 97.4% 41.8%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 44.0 3.66e-01 100.0% 45.9%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 46.0 3.84e-01 100.0% 49.6%
3q39B02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 42.0 3.84e-01 100.0% 55.5%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 40.0 3.24e-01 100.0% 37.4%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.57 40.0 3.13e-01 84.4% 34.4%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 41.0 3.31e-01 100.0% 37.8%
5v6fA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.56 39.0 3.29e-01 100.0% 40.9%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 40.0 3.58e-01 100.0% 54.4%
2fr5A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 38.0 3.16e-01 100.0% 41.2%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 47.0 3.55e-01 98.7% 54.3%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 35.0 3.22e-01 81.8% 48.6%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 38.0 2.85e-01 100.0% 29.4%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 45.0 3.53e-01 100.0% 48.3%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 36.0 2.87e-01 84.4% 32.7%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.98e-01 96.1% 76.7%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 39.0 3.09e-01 100.0% 38.7%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 44.0 3.61e-01 100.0% 90.6%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968342 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.81 54.0 6.47e-01 90.9% 100.0%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.78 51.0 5.99e-01 93.5% 94.5%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.78 51.0 5.98e-01 93.5% 94.5%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.78 52.0 6.08e-01 96.1% 96.4%
25624 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.78 51.0 6.05e-01 90.9% 100.0%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.76 54.0 6.07e-01 93.5% 93.3%
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 51.0 5.95e-01 96.1% 98.2%
3958368 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 48.0 4.60e-01 97.4% 56.7%
3241391 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 43.0 3.89e-01 97.4% 44.0%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.74 51.0 5.24e-01 93.5% 73.3%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 51.0 5.33e-01 93.5% 78.6%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 52.0 5.69e-01 94.8% 87.7%
5027230 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.73 45.0 4.40e-01 97.4% 56.5%
3289921 11.1.1.424 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2771 0.71 48.0 4.00e-01 100.0% 40.0%
3588755 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 59.0 6.05e-01 100.0% 95.9%
4970155 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 50.0 4.26e-01 100.0% 47.5%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.28e-01 93.5% 80.0%
3959440 4.1.1.180 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3107 0.69 54.0 5.78e-01 92.2% 100.0%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 51.0 5.23e-01 93.5% 80.0%
3404526 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 45.0 4.24e-01 100.0% 54.7%
4648475 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.69 48.0 5.36e-01 98.7% 95.0%
3590658 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.82e-01 97.4% 100.0%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.68 51.0 5.51e-01 93.5% 93.8%
3994984 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.66 49.0 5.27e-01 100.0% 93.8%
3508990 3115.3.1.2 ↗ a+b two layers › GP2-like › P56 › P56 › DUF2922 0.66 50.0 5.41e-01 98.7% 100.0%
3903752 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 49.0 4.36e-01 100.0% 57.1%
4943962 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 44.0 4.00e-01 100.0% 51.4%
4654177 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.64 45.0 3.15e-01 100.0% 22.9%
4500974 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.64 42.0 3.67e-01 96.1% 43.3%
5053865 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.63 47.0 4.47e-01 100.0% 67.8%
3805014 10.32.1.198 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.63 47.0 3.68e-01 100.0% 38.4%
4147528 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.62 52.0 5.40e-01 90.9% 100.0%
4397568 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.62 43.0 4.08e-01 98.7% 61.1%
3854230 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.61 55.0 3.56e-01 100.0% 37.9%
3510040 3115.3.1.2 ↗ a+b two layers › GP2-like › P56 › P56 › DUF2922 0.61 46.0 4.56e-01 98.7% 80.0%
4557537 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.59 41.0 3.92e-01 100.0% 62.2%
3971569 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.58 41.0 3.98e-01 100.0% 65.9%
4606765 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.57 46.0 4.07e-01 100.0% 60.9%
3411079 3369.1.1.1 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal 0.57 51.0 3.89e-01 100.0% 77.2%
3620107 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.56 50.0 4.10e-01 98.7% 67.9%
3802129 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.56 49.0 3.22e-01 98.7% 37.1%
4007508 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.56 36.0 4.04e-01 100.0% 100.0%
None — 0.55 45.0 3.23e-01 88.3% 59.5%
3273545 4004.1.1.1 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C 0.55 47.0 3.65e-01 100.0% 97.9%
3398695 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 44.0 3.25e-01 100.0% 32.7%
3474250 3369.1.1.0 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.55 48.0 3.63e-01 100.0% 79.5%
4223138 10.32.1.22 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CFA20_dom 0.55 48.0 3.54e-01 98.7% 38.0%
5023452 303.1.1.1 ↗ a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC 0.54 49.0 3.93e-01 98.7% 89.7%
3239261 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 44.0 2.77e-01 98.7% 17.2%
5021450 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 41.0 3.18e-01 84.4% 46.8%
1907312 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.54 40.0 3.14e-01 80.5% 40.7%
3943020 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.54 41.0 3.13e-01 81.8% 77.7%
3928295 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 46.0 3.47e-01 100.0% 56.0%
7384 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.53 47.0 3.55e-01 98.7% 54.3%
4030677 1116.1.1.0 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain 0.53 40.0 3.25e-01 100.0% 42.0%
3526517 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.52 44.0 3.03e-01 100.0% 45.4%
4072296 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.52 36.0 2.52e-01 74.0% 44.9%
3339155 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 46.0 3.56e-01 100.0% 48.0%
4410522 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.52 40.0 3.15e-01 84.4% 44.2%
5042330 4203.1.1.0 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like 0.51 38.0 3.97e-01 81.8% 90.0%
4294933 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.51 40.0 3.12e-01 84.4% 41.8%
3329474 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.50 45.0 2.90e-01 100.0% 36.2%