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NC_019912.1__YP_007236406.1__ISGA_48__00048
Bact-VirNC_019912.1__YP_007236406.1__ISGA_48__00048
Identity
- Accession:
- NC_019912 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Taxonomy
TaxID: 2884431
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-137
Domain cluster:
rep: NC_042001.1__YP_009610157.1__FDI28_gp81__00029__D22-140
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.67 | 41.0 | 4.46e-01 | 89.3% | 73.1% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.66 | 37.0 | 4.38e-01 | 88.5% | 83.3% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.61 | 28.0 | 3.75e-01 | 80.2% | 85.5% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 32.0 | 3.99e-01 | 78.6% | 87.8% |
| 2ctjA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.59 | 31.0 | 3.51e-01 | 76.3% | 67.4% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.58 | 30.0 | 3.10e-01 | 83.2% | 49.2% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 35.0 | 3.95e-01 | 93.9% | 86.6% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 30.0 | 3.11e-01 | 90.8% | 55.4% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 38.0 | 4.09e-01 | 91.6% | 93.4% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 37.0 | 4.05e-01 | 92.4% | 90.8% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 40.0 | 4.11e-01 | 83.2% | 100.0% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 30.0 | 3.48e-01 | 92.4% | 85.9% |
| 1ti2B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 32.0 | 3.19e-01 | 75.6% | 61.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586965 | 304.48.1.48 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 | 0.67 | 36.0 | 3.86e-01 | 84.7% | 59.1% |
| 4876714 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.66 | 43.0 | 3.69e-01 | 89.3% | 41.7% |
| 4571276 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.65 | 36.0 | 4.42e-01 | 82.4% | 86.3% |
| 4564327 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.63 | 39.0 | 4.59e-01 | 94.7% | 96.4% |
| 4182456 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.60 | 35.0 | 4.18e-01 | 87.8% | 87.1% |
| 3572643 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.59 | 34.0 | 3.88e-01 | 87.8% | 78.9% |
| 3192747 | 304.57.1.2 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › Pop8 | 0.58 | 33.0 | 3.39e-01 | 86.3% | 56.8% |
| 4011217 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.57 | 32.0 | 3.41e-01 | 83.2% | 60.9% |
| 3707615 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 44.0 | 4.13e-01 | 96.9% | 68.8% |
| 3986253 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.55 | 32.0 | 3.33e-01 | 90.1% | 58.3% |
| 3409717 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.54 | 45.0 | 3.76e-01 | 93.1% | 92.4% |
| 3204533 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 25.0 | 3.14e-01 | 88.5% | 70.7% |
| 3232320 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 49.0 | 3.76e-01 | 100.0% | 96.7% |
| 3234426 | 174.1.1.14 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN | 0.53 | 39.0 | 3.69e-01 | 76.3% | 91.9% |
| 3231554 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 42.0 | 3.17e-01 | 92.4% | 94.0% |
| 3988057 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.50 | 39.0 | 2.74e-01 | 100.0% | 25.2% |
| 76239 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.50 | 27.0 | 2.86e-01 | 84.0% | 53.4% |