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YP_007348291.1
Arc-VirNC_020077__YP_007348291.1__STSV2-47__00047
Identity
- Accession:
- NC_020077 ↗
- Protein ID:
- YP_007348291.1 ↗
- Kingdom:
- archaea
Quality
74.9
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 186-262
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8aA02 | 1.10.3870.10 | Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily | 0.60 | 48.0 | 4.18e-01 | 87.0% | 93.1% |
| 2aboA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.54 | 42.0 | 3.53e-01 | 83.1% | 86.3% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.52 | 41.0 | 3.78e-01 | 92.2% | 95.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3609348 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.63 | 45.0 | 4.37e-01 | 74.0% | 89.4% |
| 3266498 | 3361.1.1.0 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 | 0.61 | 48.0 | 4.57e-01 | 85.7% | 76.7% |
| 3973823 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.56 | 36.0 | 3.25e-01 | 93.5% | 46.4% |
| 4207992 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.55 | 49.0 | 3.23e-01 | 100.0% | 94.2% |
| 5051912 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.53 | 38.0 | 4.09e-01 | 74.0% | 92.3% |
D2
high
residues 272-317
D3
medium
residues 3-156
Domain cluster:
rep: IMGVR_UViG_3300020359_000115-3300020359-Ga0211610_100031417__D4-167
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02195.27 best | ParB_N | 29.5 | 9.90e-07 | 71.4% | 75.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.80 | 47.0 | 5.75e-01 | 75.3% | 88.2% |
| 3vtiA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 25.0 | 3.17e-01 | 79.2% | 51.0% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.64 | 25.0 | 3.61e-01 | 92.9% | 75.0% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.62 | 31.0 | 3.24e-01 | 100.0% | 51.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073612 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.87 | 59.0 | 7.13e-01 | 77.3% | 100.0% |
| 3948471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.84 | 60.0 | 6.97e-01 | 76.0% | 98.3% |
| 2061501 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.80 | 47.0 | 5.85e-01 | 85.7% | 90.9% |
| 2543651 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 46.0 | 5.96e-01 | 79.2% | 100.0% |
| 3278076 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.78 | 46.0 | 5.97e-01 | 79.2% | 100.0% |
| 85732 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.72 | 44.0 | 4.92e-01 | 79.9% | 77.7% |
| 5018770 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.63 | 47.0 | 5.19e-01 | 77.3% | 96.8% |
| 5050551 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.63 | 44.0 | 4.45e-01 | 70.1% | 95.3% |
| 4947338 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.58 | 53.0 | 4.91e-01 | 96.8% | 95.3% |
| 3327406 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 32.0 | 3.44e-01 | 83.1% | 72.3% |
| 3311701 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.51 | 24.0 | 3.23e-01 | 98.1% | 82.4% |
| 4493280 | 109.4.1.130 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHAT | 0.51 | 32.0 | 3.61e-01 | 81.2% | 81.7% |