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YP_007348304.1

Arc-Vir

NC_020077__YP_007348304.1__STSV2-60__00060

Identity

Accession:
NC_020077 ↗
Protein ID:
YP_007348304.1 ↗
Kingdom:
archaea

Quality

89.7 mean pLDDT

Taxonomy

Bicaudaviridae› Sulfolobus_virus_STSV2

TaxID: 1123964

Cluster

View cluster (4 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-28_99-127
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.78 44.0 4.92e-01 96.5% 71.1%
1yelA00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.72 62.0 5.19e-01 100.0% 96.1%
1y7uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 58.0 4.23e-01 100.0% 57.3%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.67 55.0 4.46e-01 94.7% 96.5%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.67 56.0 4.65e-01 100.0% 97.3%
4lduA02 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.66 52.0 4.41e-01 91.2% 98.1%
6vg1A01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.65 36.0 3.07e-01 82.5% 32.3%
4p9iA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.65 54.0 3.95e-01 94.7% 47.2%
5c33A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.64 55.0 3.97e-01 100.0% 55.6%
3tw6C01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.64 51.0 3.08e-01 94.7% 19.6%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.63 41.0 4.46e-01 100.0% 86.4%
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 50.0 3.39e-01 96.5% 34.8%
1a9xA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 50.0 3.52e-01 98.2% 42.9%
7rpyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.19e-01 96.5% 66.0%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 49.0 3.72e-01 93.0% 63.6%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 4.72e-01 89.5% 100.0%
3qjhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 49.0 4.00e-01 94.7% 71.0%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 3.78e-01 96.5% 66.1%
2q2tA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 3.93e-01 94.7% 100.0%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 41.0 3.35e-01 96.5% 39.1%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.57 39.0 2.88e-01 94.7% 26.6%
2zyrA02 2.60.40.2190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.03e-01 94.7% 63.8%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 3.92e-01 100.0% 64.6%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 45.0 4.43e-01 93.0% 98.4%
1uyjA02 2.170.15.10 Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 0.55 50.0 3.39e-01 100.0% 74.9%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.55 36.0 3.22e-01 91.2% 44.2%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 3.81e-01 100.0% 70.1%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.12e-01 96.5% 78.8%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.55 35.0 3.58e-01 91.2% 66.1%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.36e-01 82.5% 55.0%
3d4iB01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 43.0 2.86e-01 87.7% 100.0%
5t89X04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 3.89e-01 96.5% 64.5%
1iyjB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.23e-01 91.2% 91.5%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 3.80e-01 98.2% 66.7%
2v5mA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.68e-01 96.5% 65.4%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.83e-01 96.5% 69.5%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.63e-01 98.2% 76.6%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.86e-01 98.2% 69.3%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 46.0 3.97e-01 100.0% 67.4%
3shsA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.73e-01 96.5% 60.2%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.52 46.0 3.38e-01 100.0% 97.4%
4mbrA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 2.87e-01 82.5% 62.0%
1im3D00 2.60.40.1200 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 3.68e-01 96.5% 69.5%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.51 44.0 2.69e-01 96.5% 16.8%
3ubfA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 44.0 3.62e-01 96.5% 62.7%
5k6uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 3.71e-01 96.5% 66.7%
5oyjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.62e-01 96.5% 61.1%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3804746 1.1.11.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.81 68.0 5.28e-01 91.2% 94.1%
3674876 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.79 67.0 5.04e-01 94.7% 74.6%
3832696 1.1.11.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.79 66.0 5.20e-01 91.2% 98.2%
3829560 1.1.11.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.79 66.0 5.20e-01 91.2% 95.6%
3382288 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.77 64.0 5.10e-01 93.0% 87.0%
3419133 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.74 60.0 4.81e-01 91.2% 86.1%
3466598 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.71 61.0 4.81e-01 96.5% 88.2%
3448244 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.69 58.0 4.72e-01 100.0% 94.2%
5019409 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.68 43.0 2.68e-01 96.5% 11.6%
3537353 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.66 43.0 2.69e-01 94.7% 11.9%
3436078 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.66 54.0 4.38e-01 96.5% 89.2%
3594020 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 56.0 3.87e-01 100.0% 53.2%
3658974 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.64 47.0 2.88e-01 98.2% 13.8%
4238063 5.1.4.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.63 49.0 2.97e-01 98.2% 13.2%
3307566 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 53.0 4.76e-01 96.5% 97.5%
3995548 3698.1.1.2 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C 0.61 50.0 3.70e-01 94.7% 55.2%
3174442 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 43.0 2.82e-01 96.5% 16.9%
3857972 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.60 52.0 4.20e-01 96.5% 68.6%
4826815 10.1.1.14 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CoV_S1 0.60 47.0 3.44e-01 100.0% 29.9%
5032559 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 37.0 3.16e-01 96.5% 40.0%
5053291 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.10e-01 100.0% 72.7%
4582456 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.58 49.0 4.68e-01 98.2% 98.6%
3235657 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.58 43.0 4.75e-01 93.0% 100.0%
3676329 5.1.4.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.58 46.0 2.92e-01 96.5% 17.9%
3188296 375.1.1.132 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NOB1_Zn_bind 0.58 50.0 4.93e-01 96.5% 93.3%
4636444 288.1.1.2 ↗ a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CheD 0.57 49.0 3.41e-01 96.5% 83.2%
3504735 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 50.0 3.98e-01 98.2% 61.9%
4965032 375.1.1.343 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7835 0.57 48.0 4.88e-01 94.7% 94.5%
5081495 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 3.68e-01 96.5% 45.0%
3837783 3291.1.1.50 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › FmiP_Thoc5 0.56 44.0 3.52e-01 96.5% 43.6%
4028836 375.5.1.1 ↗ few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.56 45.0 4.38e-01 91.2% 80.0%
None — 0.56 46.0 2.94e-01 93.0% 64.1%
175113 2.1.1.28 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.56 44.0 3.37e-01 91.2% 69.2%
3213166 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 44.0 2.80e-01 91.2% 66.4%
3594204 209.1.1.11 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › DUF5075 0.55 45.0 3.12e-01 93.0% 59.0%
3856323 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.54 47.0 3.57e-01 96.5% 48.1%
3514218 206.1.3.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 0.54 43.0 2.97e-01 94.7% 23.6%
4149684 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.54 39.0 2.54e-01 96.5% 16.3%
4217707 298.1.1.2 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Homoserine_dh 0.54 43.0 3.27e-01 98.2% 90.0%
4360313 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 3.99e-01 98.2% 65.3%
3365706 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 48.0 3.14e-01 100.0% 32.8%
3998929 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 46.0 3.55e-01 100.0% 76.2%
5069215 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 3.98e-01 100.0% 64.7%
3388491 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 45.0 3.81e-01 96.5% 63.2%
3499913 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.70e-01 96.5% 64.0%
4294930 375.1.1.141 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4674 0.52 47.0 3.60e-01 100.0% 80.0%
3903191 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.52 43.0 3.67e-01 98.2% 58.0%
5021275 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 40.0 3.36e-01 91.2% 96.4%
3665005 304.102.1.1 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.51 41.0 2.74e-01 91.2% 79.8%
D2 medium residues 29-98
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nezH00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 52.0 4.42e-01 94.3% 70.0%
2fauA02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 51.0 4.13e-01 91.4% 58.4%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 3.93e-01 91.4% 55.0%
3wbiA04 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 49.0 3.92e-01 94.3% 97.9%
1wftA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 48.0 4.27e-01 94.3% 71.2%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.45e-01 100.0% 81.0%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 38.0 3.07e-01 82.9% 34.5%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.66e-01 94.3% 51.8%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.09e-01 95.7% 66.7%
7wsoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.10e-01 94.3% 71.8%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 4.14e-01 94.3% 65.3%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 4.04e-01 95.7% 71.3%
4n5uA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.75e-01 94.3% 56.5%
4r7vA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.44e-01 90.0% 62.4%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.71e-01 94.3% 60.2%
3b83C00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.72e-01 95.7% 60.6%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 4.04e-01 94.3% 73.9%
2dn7A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.59e-01 94.3% 55.1%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.79e-01 94.3% 60.8%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.53 35.0 2.93e-01 87.1% 35.3%
2dbjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.59e-01 94.3% 56.9%
2cuhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.61e-01 94.3% 64.8%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.52 31.0 2.97e-01 80.0% 45.9%
4do8A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.52 36.0 3.74e-01 94.3% 80.3%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.58e-01 95.7% 69.2%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 43.0 4.16e-01 95.7% 87.3%
1flkA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.51 38.0 2.86e-01 82.9% 36.6%
6dgiA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 41.0 3.37e-01 94.3% 67.4%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 3.22e-01 95.7% 53.0%
2o6cA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.50 40.0 3.27e-01 95.7% 53.8%
4issA03 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.50 42.0 3.45e-01 97.1% 92.0%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.50 37.0 3.19e-01 81.4% 58.0%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3718504 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.66 54.0 4.06e-01 91.4% 49.7%
3623119 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.65 53.0 4.13e-01 91.4% 50.0%
3614824 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 54.0 3.95e-01 94.3% 55.0%
3541209 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.64 52.0 4.08e-01 91.4% 53.5%
3546753 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.60 50.0 4.18e-01 95.7% 63.8%
3185811 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.36e-01 95.7% 71.3%
3652660 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.60 49.0 3.45e-01 94.3% 77.6%
3514167 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.92e-01 94.3% 47.4%
3251320 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.59 45.0 3.13e-01 85.7% 51.8%
3320319 4.1.1.152 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1262 0.58 44.0 3.52e-01 81.4% 51.4%
3792941 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 45.0 3.94e-01 95.7% 53.9%
4668960 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 3.61e-01 75.7% 58.2%
4964280 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 4.15e-01 92.9% 67.8%
4933925 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 3.84e-01 92.9% 52.0%
4974839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.19e-01 77.1% 98.0%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 40.0 3.39e-01 75.7% 54.2%
4063634 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 40.0 3.35e-01 77.1% 53.2%
3514259 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 44.0 3.86e-01 95.7% 55.7%
3793294 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.84e-01 100.0% 96.6%
4065411 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 36.0 3.81e-01 91.4% 78.3%
3867707 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 43.0 3.77e-01 94.3% 53.9%
4607738 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 40.0 3.47e-01 77.1% 60.0%
3802001 207.1.1.174 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 0.55 41.0 2.50e-01 81.4% 13.0%
3855706 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 3.90e-01 94.3% 63.0%
3263518 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 4.07e-01 95.7% 66.7%
3891134 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.54 44.0 3.55e-01 94.3% 68.7%
5035793 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 3.86e-01 78.6% 75.7%
1220396 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 42.0 3.72e-01 94.3% 57.4%
5081281 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 3.09e-01 94.3% 32.1%
3817275 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 43.0 3.71e-01 92.9% 58.8%
4400596 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.53 41.0 3.21e-01 85.7% 66.3%
4000172 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.53 42.0 3.70e-01 92.9% 85.2%
4195041 4090.1.1.1 ↗ a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like 0.52 45.0 3.58e-01 100.0% 66.7%
None — 0.52 44.0 2.64e-01 100.0% 59.8%
3164640 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.52 41.0 3.06e-01 94.3% 97.7%
4835076 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.52 38.0 2.86e-01 81.4% 49.5%
3606467 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.20e-01 81.4% 59.2%
4963012 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 37.0 3.37e-01 80.0% 92.4%
3815036 3397.1.1.0 ↗ a+b complex topology › Tic22 › Tic22 › Tic22 0.51 40.0 3.35e-01 85.7% 63.2%
3727692 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 40.0 3.03e-01 88.6% 35.1%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 36.0 3.52e-01 82.9% 69.3%
3166677 3792.1.1.0 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain 0.50 34.0 3.31e-01 92.9% 60.0%