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YP_007379047.1
Arc-VirNC_020158__YP_007379047.1__HVTV1-142__00141
Identity
- Accession:
- NC_020158 ↗
- Protein ID:
- YP_007379047.1 ↗
- Kingdom:
- archaea
Quality
71.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Druskaviridae›
Tredecimvirus›
Haloarcula_vallismortis_tailed_virus_1
TaxID: 1262528
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-101
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 34.0 | 4.37e-01 | 75.3% | 100.0% |
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 35.0 | 4.16e-01 | 90.3% | 88.5% |
| 2vpkA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 43.0 | 4.07e-01 | 86.0% | 87.8% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 33.0 | 3.60e-01 | 71.0% | 73.0% |
| 2cklA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 34.0 | 3.35e-01 | 74.2% | 56.1% |
| 3i3nA01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 45.0 | 4.04e-01 | 92.5% | 76.8% |
| 5eyaF00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 32.0 | 3.52e-01 | 79.6% | 71.1% |
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 42.0 | 3.82e-01 | 82.8% | 82.7% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 32.0 | 3.30e-01 | 75.3% | 60.2% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 35.0 | 3.40e-01 | 82.8% | 57.7% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 34.0 | 3.64e-01 | 72.0% | 72.5% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 32.0 | 3.58e-01 | 72.0% | 74.0% |
| 3ga1A00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.54 | 40.0 | 3.77e-01 | 78.5% | 82.3% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 33.0 | 3.55e-01 | 72.0% | 70.4% |
| 2yt5A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 35.0 | 4.03e-01 | 76.3% | 95.5% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 36.0 | 4.06e-01 | 77.4% | 100.0% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 32.0 | 3.61e-01 | 71.0% | 78.9% |
| 2mbvA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 36.0 | 3.61e-01 | 76.3% | 67.7% |
| 5eupA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.53 | 40.0 | 3.78e-01 | 82.8% | 82.5% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 32.0 | 3.34e-01 | 71.0% | 65.1% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 35.0 | 3.34e-01 | 80.6% | 58.7% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 31.0 | 2.87e-01 | 71.0% | 44.2% |
| 2od1A00 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 28.0 | 3.54e-01 | 72.0% | 98.0% |
| 3hctA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 31.0 | 3.00e-01 | 71.0% | 51.9% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.50 | 38.0 | 3.20e-01 | 82.8% | 66.3% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264125 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 38.0 | 4.31e-01 | 73.1% | 81.4% |
| 4263981 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.62 | 52.0 | 4.39e-01 | 91.4% | 90.3% |
| 3326708 | 226.1.1.3 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ | 0.62 | 49.0 | 4.22e-01 | 84.9% | 82.8% |
| 4214634 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.61 | 35.0 | 3.97e-01 | 76.3% | 75.7% |
| 4020940 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.60 | 50.0 | 4.09e-01 | 91.4% | 77.7% |
| 3409356 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.60 | 50.0 | 4.45e-01 | 92.5% | 83.0% |
| 3809673 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.60 | 34.0 | 3.63e-01 | 75.3% | 63.7% |
| 3177376 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.59 | 49.0 | 3.93e-01 | 92.5% | 85.0% |
| 3679587 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.59 | 47.0 | 3.77e-01 | 87.1% | 71.6% |
| 3844622 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.58 | 48.0 | 3.58e-01 | 92.5% | 56.5% |
| 3523249 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.58 | 48.0 | 4.05e-01 | 92.5% | 85.5% |
| 3479484 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 33.0 | 3.68e-01 | 71.0% | 70.7% |
| 3175339 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.58 | 45.0 | 4.11e-01 | 87.1% | 81.5% |
| 3929205 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 33.0 | 3.51e-01 | 75.3% | 65.0% |
| 3174259 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.57 | 44.0 | 3.88e-01 | 83.9% | 73.1% |
| 3483271 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 32.0 | 3.69e-01 | 78.5% | 76.9% |
| 3860836 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.57 | 33.0 | 3.65e-01 | 77.4% | 71.6% |
| 3267414 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 33.0 | 3.03e-01 | 72.0% | 42.4% |
| 3600371 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 33.0 | 3.57e-01 | 72.0% | 67.1% |
| 3593356 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 31.0 | 3.59e-01 | 71.0% | 76.6% |
| 3740618 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 33.0 | 3.43e-01 | 71.0% | 62.4% |
| 3748776 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 32.0 | 3.48e-01 | 72.0% | 66.3% |
| 3785744 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.55 | 42.0 | 3.72e-01 | 84.9% | 78.4% |
| 4014325 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 31.0 | 3.54e-01 | 80.6% | 74.3% |
| 3650619 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.54 | 31.0 | 3.27e-01 | 78.5% | 61.2% |
| 3888382 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 33.0 | 3.42e-01 | 78.5% | 63.3% |
| 3744884 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.54 | 34.0 | 3.78e-01 | 71.0% | 80.8% |
| 4923932 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.54 | 32.0 | 3.76e-01 | 71.0% | 88.5% |
| 3397204 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 33.0 | 3.27e-01 | 72.0% | 57.0% |
| 3224471 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 43.0 | 4.00e-01 | 90.3% | 85.6% |
| 3669972 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.53 | 40.0 | 3.69e-01 | 81.7% | 88.0% |
| 3309464 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.53 | 33.0 | 2.99e-01 | 78.5% | 45.6% |
| 3315256 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.53 | 32.0 | 3.19e-01 | 72.0% | 56.8% |
| 3770485 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 31.0 | 3.12e-01 | 72.0% | 54.0% |
| 3464584 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 33.0 | 3.00e-01 | 72.0% | 45.6% |
| 3276478 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 32.0 | 3.31e-01 | 72.0% | 63.5% |
| 3853716 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 31.0 | 2.81e-01 | 72.0% | 40.0% |
| 3341777 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.53 | 32.0 | 2.94e-01 | 72.0% | 45.0% |
| 3887832 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.53 | 31.0 | 3.40e-01 | 72.0% | 72.0% |
| 3553170 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 32.0 | 2.87e-01 | 72.0% | 41.5% |
| 3320012 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.52 | 40.0 | 3.52e-01 | 82.8% | 77.9% |
| 3788673 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.52 | 31.0 | 3.29e-01 | 71.0% | 63.5% |
| 4388520 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 32.0 | 3.38e-01 | 71.0% | 70.0% |
| 3887597 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.52 | 30.0 | 3.25e-01 | 71.0% | 68.0% |
| 3814654 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.52 | 31.0 | 3.01e-01 | 72.0% | 51.4% |
| None | — | 0.51 | 30.0 | 3.29e-01 | 71.0% | 70.7% | |
| 3574496 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 30.0 | 3.10e-01 | 71.0% | 60.0% |
| 3455010 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.51 | 31.0 | 3.26e-01 | 73.1% | 65.9% |
| 3912498 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.51 | 40.0 | 3.83e-01 | 89.2% | 91.3% |
| 3326306 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 31.0 | 3.19e-01 | 73.1% | 62.2% |
| 3245587 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 33.0 | 3.27e-01 | 71.0% | 61.0% |
| 3770354 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 35.0 | 3.67e-01 | 72.0% | 77.6% |
| 3770827 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.51 | 33.0 | 3.48e-01 | 92.5% | 74.1% |
| 3787607 | 7023.1.1.2 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › Pex2_Pex12 | 0.51 | 32.0 | 2.27e-01 | 83.9% | 18.8% |
| 3621807 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 37.0 | 3.71e-01 | 78.5% | 100.0% |
| 4024984 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.50 | 30.0 | 3.55e-01 | 71.0% | 91.7% |