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NC_020842.1__YP_007673413.1__CGPG_00031__00031

Bact-Vir

NC_020842.1__YP_007673413.1__CGPG_00031__00031

Identity

Accession:
NC_020842 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cbastvirus› Cellulophaga_phage_phiST

TaxID: 756282

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-185
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.82 50.0 5.62e-01 94.0% 76.7%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.76 48.0 5.22e-01 94.0% 75.5%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.75 59.0 6.16e-01 100.0% 87.1%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.73 45.0 5.02e-01 94.0% 77.1%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.68 59.0 6.16e-01 100.0% 96.8%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 56.0 5.95e-01 99.4% 99.3%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 47.0 4.68e-01 100.0% 69.1%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 56.0 5.93e-01 95.2% 100.0%
1swgC00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.65 44.0 5.00e-01 79.5% 90.5%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 43.0 4.29e-01 98.8% 65.5%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.61 41.0 4.82e-01 96.4% 97.5%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.59 36.0 4.35e-01 89.8% 90.3%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.58 48.0 4.51e-01 88.0% 81.4%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.56 52.0 4.49e-01 100.0% 99.2%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 44.0 3.66e-01 83.1% 95.9%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 44.0 3.47e-01 83.7% 45.3%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 4.22e-01 92.8% 97.3%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.53 48.0 3.94e-01 97.6% 100.0%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.52 48.0 3.51e-01 100.0% 73.6%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.52 48.0 4.00e-01 100.0% 88.5%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 36.0 3.86e-01 97.0% 82.6%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.51 37.0 3.09e-01 72.9% 94.6%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 36.0 4.11e-01 80.1% 95.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.51 47.0 4.08e-01 100.0% 98.8%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.50 33.0 3.24e-01 81.9% 62.1%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 37.0 3.77e-01 97.0% 76.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967771 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.87 67.0 7.52e-01 98.8% 100.0%
4928614 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.83 54.0 6.15e-01 94.0% 85.2%
875 9.13.1.3 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.82 50.0 5.62e-01 94.0% 76.7%
4928158 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.82 53.0 5.94e-01 94.0% 82.0%
3945260 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.79 68.0 7.02e-01 100.0% 94.3%
3203571 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.77 51.0 5.53e-01 94.0% 79.3%
3635091 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.69 54.0 5.40e-01 94.0% 79.9%
3785038 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.66 52.0 5.17e-01 94.0% 78.9%
3838829 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.65 62.0 5.98e-01 100.0% 100.0%
3837982 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.65 62.0 6.00e-01 100.0% 93.3%
3834458 5084.1.1.27 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2921_N 0.65 56.0 5.55e-01 100.0% 88.2%
3840002 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.61 57.0 5.54e-01 98.8% 100.0%
3960523 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 36.0 4.54e-01 91.6% 95.2%
3330368 9.3.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N 0.59 54.0 5.30e-01 99.4% 90.6%
4508983 5084.5.1.18 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.56 48.0 3.60e-01 91.6% 93.3%
3387592 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.55 43.0 3.28e-01 83.7% 37.6%
3967717 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.54 42.0 3.44e-01 89.2% 43.7%
5079639 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 43.0 3.60e-01 84.9% 87.5%
3744079 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.53 39.0 4.47e-01 94.0% 100.0%
3251788 9.1.1.37 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 0.52 46.0 4.70e-01 99.4% 94.5%
5071127 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.52 42.0 3.48e-01 86.1% 88.9%
3965077 5084.4.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 0.51 48.0 4.01e-01 99.4% 98.1%
2141087 5084.5.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.50 45.0 3.51e-01 96.4% 93.4%
3976425 5084.5.1.8 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.50 45.0 4.14e-01 95.8% 98.1%