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NC_020842.1__YP_007673423.1__CGPG_00041__00041
Bact-VirNC_020842.1__YP_007673423.1__CGPG_00041__00041
Identity
- Accession:
- NC_020842 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 756282
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-123
Domain cluster:
rep: MK504444.1__QBJ03634.1__UCC3521_0096__00096__D7-98
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00216.27 best | Bac_DNA_binding | 35.5 | 1.30e-08 | 88.7% | 97.8% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pt4B00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.92 | 77.0 | 8.08e-01 | 90.6% | 94.8% |
| 5ekaA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.91 | 67.0 | 7.47e-01 | 91.5% | 94.1% |
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.87 | 77.0 | 7.93e-01 | 92.5% | 97.1% |
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.84 | 71.0 | 7.46e-01 | 96.2% | 99.0% |
| 2iieA01 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.83 | 72.0 | 7.18e-01 | 91.5% | 89.8% |
| 6lmjB00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.81 | 69.0 | 7.19e-01 | 89.6% | 98.0% |
| 4fmrA02 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.79 | 61.0 | 6.67e-01 | 89.6% | 96.6% |
| 2ndpA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.78 | 65.0 | 6.74e-01 | 89.6% | 93.9% |
| 4n1vA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.78 | 64.0 | 6.80e-01 | 89.6% | 97.8% |
| 1wtuA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.66 | 57.0 | 5.88e-01 | 97.2% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4165727 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.97 | 63.0 | 7.87e-01 | 88.7% | 100.0% |
| 4028228 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.97 | 61.0 | 7.58e-01 | 86.8% | 97.1% |
| 4643900 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.97 | 63.0 | 7.79e-01 | 88.7% | 100.0% |
| 4272320 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.95 | 56.0 | 7.25e-01 | 83.0% | 98.5% |
| 4599773 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.94 | 62.0 | 7.50e-01 | 89.6% | 97.3% |
| 3971236 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.94 | 62.0 | 7.52e-01 | 89.6% | 97.3% |
| 222497 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.93 | 78.0 | 8.10e-01 | 90.6% | 93.9% |
| 1859698 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.91 | 67.0 | 7.47e-01 | 91.5% | 94.1% |
| 4967892 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.91 | 63.0 | 7.30e-01 | 91.5% | 94.9% |
| 4227571 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.88 | 79.0 | 8.18e-01 | 99.1% | 100.0% |
| 5073165 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.88 | 72.0 | 7.77e-01 | 88.7% | 100.0% |
| 4051851 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.88 | 76.0 | 7.81e-01 | 89.6% | 100.0% |
| 4183750 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.87 | 62.0 | 7.07e-01 | 97.2% | 96.2% |
| 163570 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.87 | 77.0 | 7.93e-01 | 92.5% | 97.1% |
| 4508411 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.87 | 74.0 | 7.69e-01 | 96.2% | 95.0% |
| 4662987 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.87 | 73.0 | 7.72e-01 | 91.5% | 98.9% |
| 4240651 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.87 | 73.0 | 7.49e-01 | 90.6% | 93.0% |
| 4194238 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.87 | 63.0 | 7.17e-01 | 89.6% | 98.8% |
| 4088528 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.86 | 77.0 | 7.90e-01 | 94.3% | 99.0% |
| 4108127 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.86 | 71.0 | 7.55e-01 | 91.5% | 96.8% |
| 4284216 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.85 | 71.0 | 7.51e-01 | 91.5% | 97.9% |
| 3964061 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.85 | 76.0 | 7.68e-01 | 93.4% | 99.0% |
| 4274974 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.82 | 69.0 | 7.11e-01 | 93.4% | 95.0% |
| 2627940 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.81 | 70.0 | 7.27e-01 | 89.6% | 97.0% |
| 4681823 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.81 | 67.0 | 6.93e-01 | 91.5% | 93.0% |
| 1916727 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.78 | 65.0 | 6.74e-01 | 89.6% | 93.9% |
| 1919590 | 101.17.1.2 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-DNA_bdg | 0.77 | 65.0 | 6.23e-01 | 99.1% | 79.2% |
| 4168202 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.69 | 57.0 | 6.03e-01 | 88.7% | 98.9% |
| 2909 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.69 | 58.0 | 6.00e-01 | 94.3% | 100.0% |