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NC_020842.1__YP_007673441.1__CGPG_00059__00059
Bact-VirNC_020842.1__YP_007673441.1__CGPG_00059__00059
Identity
- Accession:
- NC_020842 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Taxonomy
TaxID: 756282
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-107
Domain cluster:
rep: ON453900.1__WAK79448.1__X__00024__D10-101
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fl4A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 31.0 | 3.16e-01 | 82.1% | 55.8% |
| 3qcmA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 37.0 | 2.73e-01 | 76.4% | 62.6% |
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 30.0 | 2.98e-01 | 84.0% | 54.7% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 30.0 | 2.85e-01 | 73.6% | 49.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.70 | 50.0 | 5.70e-01 | 77.4% | 98.8% |
| 3199439 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 43.0 | 3.53e-01 | 70.8% | 38.4% |
| 3699736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 37.0 | 3.91e-01 | 76.4% | 68.1% |
| 4098000 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.60 | 37.0 | 3.56e-01 | 100.0% | 55.0% |
| 3544935 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.57 | 46.0 | 4.55e-01 | 100.0% | 80.9% |
| 3778175 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.53 | 44.0 | 2.99e-01 | 94.3% | 70.2% |
| 3276016 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 3.09e-01 | 92.5% | 68.5% |
| 5019287 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.52 | 39.0 | 4.35e-01 | 84.9% | 98.8% |
| 3682129 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.52 | 42.0 | 2.92e-01 | 86.8% | 80.3% |
| 3482138 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 45.0 | 2.81e-01 | 100.0% | 41.0% |
| 3527281 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 36.0 | 3.06e-01 | 73.6% | 65.4% |
| 3588773 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.50 | 37.0 | 2.65e-01 | 77.4% | 98.5% |