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NC_020842.1__YP_007673460.1__CGPG_00079__00078

Bact-Vir

Identity

Accession:: NC_020842 ↗
Kingdom:: phage

Quality

82.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cbastvirus› Cellulophaga_phage_phiST

TaxID: 756282

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 76-190

PDB

Domain cluster: rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_1005676__D4-125

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1t7vA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.66	42.0	4.65e-01	92.2%	81.1%
1ae2A00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.59	27.0	3.09e-01	92.2%	54.7%
2vzsA05	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	40.0	4.21e-01	89.6%	79.2%
2if1A00	3.30.780.10	Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain	0.57	36.0	3.51e-01	95.7%	57.1%
3njaA02	2.10.70.100	Mainly Beta › Ribbon › Complement Module; domain 1 ›	0.57	25.0	3.66e-01	87.8%	100.0%
5l16A01	3.30.1330.10	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain	0.56	47.0	4.59e-01	87.8%	100.0%
3j7yU00	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.52	35.0	3.61e-01	88.7%	72.1%
2ab5B01	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.51	36.0	3.55e-01	94.8%	65.6%
2r5rA00	3.10.270.10	Alpha Beta › Roll › Urate Oxidase › Urate Oxidase;	0.51	41.0	3.19e-01	85.2%	57.7%
4k7rA02	2.20.200.10	Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP)	0.51	27.0	3.20e-01	95.7%	74.0%
5n9bA01	2.60.40.2160	Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1	0.51	37.0	3.54e-01	93.9%	64.2%
2z6cA00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.50	35.0	3.52e-01	72.2%	95.0%
3kulA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.50	33.0	3.64e-01	90.4%	85.4%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4955075	310.3.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related	0.71	39.0	4.81e-01	80.0%	84.9%
3950275	242.1.1.0 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases	0.62	39.0	4.43e-01	93.0%	85.9%
4183692	225.1.1.3 ↗	a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c	0.54	45.0	3.87e-01	89.6%	76.0%
3526610	223.2.1.4 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN	0.53	42.0	3.48e-01	84.3%	73.7%
3602137	242.1.1.7 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3	0.52	33.0	3.57e-01	95.7%	75.8%
3610873	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.51	46.0	3.51e-01	100.0%	80.8%
3935986	223.2.1.4 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN	0.50	39.0	3.26e-01	81.7%	57.4%
3062889	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.50	46.0	3.96e-01	99.1%	84.5%