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NC_020842.1__YP_007673477.1__CGPG_00096__00095

Bact-Vir

NC_020842.1__YP_007673477.1__CGPG_00096__00095

Identity

Accession:
NC_020842 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cbastvirus› Cellulophaga_phage_phiST

TaxID: 756282

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-120
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hf6A00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 38.0 3.50e-01 84.0% 51.7%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.58 37.0 3.76e-01 83.2% 63.6%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.57 38.0 3.79e-01 84.0% 64.1%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 4.60e-01 90.8% 89.8%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 27.0 3.25e-01 83.2% 67.1%
3jvvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 29.0 3.11e-01 97.5% 57.0%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 28.0 3.05e-01 96.6% 57.0%
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.53 35.0 3.50e-01 95.0% 62.5%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 4.11e-01 88.2% 95.4%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 4.15e-01 88.2% 91.4%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 37.0 3.79e-01 85.7% 77.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 36.0 3.75e-01 86.6% 77.2%
3dteA03 3.30.450.130 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › irre protein 0.51 36.0 4.17e-01 78.2% 100.0%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 41.0 4.16e-01 88.2% 88.8%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5065641 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 42.0 3.89e-01 85.7% 58.0%
5073022 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.81e-01 85.7% 60.7%
5078530 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 37.0 3.98e-01 83.2% 74.3%
3705528 223.2.1.3 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.57 37.0 3.47e-01 85.7% 53.8%
1833801 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.57 44.0 4.60e-01 90.8% 89.8%
3273237 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.55 40.0 3.99e-01 90.8% 72.0%
5045566 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 37.0 3.92e-01 87.4% 77.1%
3672678 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.55 31.0 3.64e-01 91.6% 78.8%
3591665 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 39.0 3.42e-01 83.2% 51.8%
5052178 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 38.0 4.01e-01 86.6% 80.9%
3234328 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 43.0 4.63e-01 86.6% 100.0%
3808166 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 33.0 3.70e-01 93.3% 81.1%
4971503 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 38.0 3.73e-01 86.6% 69.5%
3280174 223.5.1.0 ↗ a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like 0.52 36.0 4.24e-01 84.0% 100.0%
4944138 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 32.0 3.37e-01 82.4% 67.6%
3714622 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 34.0 3.47e-01 88.2% 65.8%
4999961 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 37.0 3.73e-01 86.6% 72.4%
4946458 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 3.70e-01 83.2% 68.9%
5001058 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 39.0 3.70e-01 83.2% 67.9%
5046813 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 3.89e-01 88.2% 80.0%
5079496 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 3.92e-01 86.6% 80.9%
3616221 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.92e-01 95.8% 67.3%
4950075 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 37.0 3.80e-01 85.7% 78.3%
3899275 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.51 40.0 3.85e-01 91.6% 74.1%
4011407 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 41.0 4.03e-01 86.6% 84.6%
3478713 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 37.0 3.77e-01 89.9% 76.7%
5049690 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 38.0 3.61e-01 86.6% 67.1%
5073193 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.50 39.0 3.95e-01 95.0% 82.5%